Shewanella baltica OS678: Sbal678_2177
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Entry
Sbal678_2177 CDS
T01725
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbt03000
]
Sbal678_2177
Transcription factors [BR:
sbt03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sbal678_2177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
MarR
HTH_24
HTH_29
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
ADT94334
LinkDB
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Position
complement(2543737..2544591)
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AA seq
284 aa
AA seq
DB search
MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSTESYTTKIFESSMASLDTARQSLDISAINK
AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR
LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDPIL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctagaaaaggttcaaaaaagcctcacccattttagtaaatcagaacgcaaa
gttgcagaggtgatcttagcatcaccacagacagctatacattctagcatcgccacactg
gctaagatggcagatgtcagtgaacctactgtgaatcgtttctgccgccgcttagatact
aaaggcttccctgattttaagttacatctagcgcaaagtcttgcgaacggtactccttat
gtgagccgccacgttgaagaagatgattcgactgagtcgtatacgacaaaaatctttgaa
tcttcaatggcttcgcttgataccgcacgtcaaagtttagatatttcagccataaacaaa
gcggttgatatactcactcaagctaagactatttccttttttggcctaggcgcatccgct
tctgttgcccatgacgcccaaaacaaattcttccgctttaatgtgcctgtcatctgtttt
gacgatgttctaatgcaacgcatgagctgtatcaacagcaatgaaggtgatgttgttgta
ttaatttcccacacaggccgcactaagtcattgattgagatagcacgtttagcgagagaa
aacggtgcagctgtgattggtattaccgcccgcaactcgcctttgtcgatggaatgtacg
ttgcccgtgacaatggaagtgccagaagataccgacatgtatttacctatggcctcgcgt
ttagcccaattagtcactatagatgtattggcaaccggctttaccttacgcagaggtcca
cgtttccgcgataatttgaaacgggtgaaagaggtgttaaaagagtctcgcatcaataaa
gatccgatactgtaa
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