Shewanella baltica OS678: Sbal678_2755
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Entry
Sbal678_2755 CDS
T01725
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03030
DNA replication
sbt03430
Mismatch repair
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal678_2755
03430 Mismatch repair
Sbal678_2755
03440 Homologous recombination
Sbal678_2755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbt03032
]
Sbal678_2755
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_2755
Enzymes [BR:
sbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal678_2755
DNA replication proteins [BR:
sbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal678_2755
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal678_2755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
ADT94905
LinkDB
All DBs
Position
complement(3218835..3219521)
Genome browser
AA seq
228 aa
AA seq
DB search
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQIL
SIGLVPIERGEIPLARAEQKLVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTY
GRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLERHRLLREHSVIKEGSLRLGAC
RERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactgctgctgaaaacgaaacttaattggcgggcgctacgttgccaacatcag
ttatttaagggctattatcaatcgctattacctctgctggcgatgccgttatccgaagca
cctttgatggcgatggatttagagatgacaggtctcaatccgcagcaagatcaaatcctc
agcattggcttagtgccgattgagcgcggcgagatccctttagcgcgcgccgagcaaaaa
ttagtgcaaattcgcggtagtgttggccaaagcgcgacgatccacgggatcctcgataat
catctggtgcaggcggtgacgattgaggcagccatgggctggtttatcaatcaaacctat
ggtcgggtgctggtcgcgcatcatgctccgctagattgtcgctttctgcagcaggattta
ttggccatttatcatcaagcccttgtcctacccgccattgatacactcatgcttgaaagg
catcgtttgttacgggaacactcagtgattaaagagggcagtttgcgccttggcgcttgc
cgcgaacgttacggtttgcccatttatactgcccatagtgcgttgaccgatgccttagct
tgcggggaattattactggcacaaatggcggccatgggcggggcggggcaacttactgtg
gcagatttattgcgtcaatcgacttag
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