Shewanella baltica OS678: Sbal678_3145
Help
Entry
Sbal678_3145 CDS
T01725
Name
(GenBank) extracellular solute-binding protein family 3
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbt01011
]
Sbal678_3145
Enzymes [BR:
sbt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sbal678_3145
Peptidoglycan biosynthesis and degradation proteins [BR:
sbt01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sbal678_3145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
LysR_substrate
Phosphonate-bd
Lysozyme_like
Lysis_col
Motif
Other DBs
NCBI-ProteinID:
ADT95287
LinkDB
All DBs
Position
3658704..3660134
Genome browser
AA seq
476 aa
AA seq
DB search
MTRFLFALILGFLLTACQQVTVDETEFVPKKLTELRVGTLYGPQIYMTSGQGDSGFDYDM
AVLFAEYLDVPLKMVPYTNRTELYEALKKNEIDLIAAGMTETPARREQFRLGPPLYRVNQ
VLVYREGMPAPKDISDLKGKITVIADSSFVETLTQLQKHYPTLVWDQITDKDSEELLAMI
ANKEIDYTIADSSSVQINRRYLPDLRSGPVLEEKLDVVWLLPPTRSDELMSQLLAFWHQE
KLAGTLDHLNEKYFGHVKRFDYVDTRAFIRAIETVLPRYRQLFETHAGNLDWRKLAATSY
QESHWNPHARSATGVRGMMMLTQPTAKEIGITNRLDAEESIRGGAAYLNDMINRLPESIP
ESQRMWFALASYNIGYAHVEDARKLAESMELNPNAWRDLKKVLPLLQKRKYYQKTRYGYA
RGSEAVHYVDSIRRYYDTLVWVDNQSKQQNPEEEPSDLASEEPAIPAGTLSPEQPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgactcgattcctgttcgctcttatcttaggtttcttactgactgcctgtcagcaggtg
accgtggacgaaacagaattcgtgccgaaaaaattaactgagttaagagtcggcacactc
tacggcccacagatttatatgacatctggccaaggtgatagcggtttcgattacgatatg
gcggtattgttcgccgaatacttagatgtgcccttaaaaatggtgccctacactaaccgt
accgagctgtacgaagcccttaaaaagaatgaaatcgacctcattgccgcgggcatgaca
gaaacgcccgcaaggcgtgaacagttccgcctaggaccgccgctgtaccgcgttaatcaa
gtattggtgtatcgcgaaggcatgccagcgcccaaagatatcagcgacttaaagggtaag
atcactgtcatcgccgactcttccttcgtcgagacattaactcaattgcaaaagcattat
ccaacgctggtgtgggatcaaattaccgacaaagacagcgaagaattgctggctatgatc
gccaacaaagaaattgactacaccatagcagactccagcagcgtacaaatcaaccgccgc
tacttacccgatctgcgctctggccccgtacttgaagaaaagctcgatgtagtctggctg
ttgccgccgacccgcagtgatgaactcatgagtcagttactggccttttggcaccaagaa
aagctggctggcacgctcgatcatctcaacgagaaatactttggccatgtgaagcgcttc
gattatgtcgatactcgggcatttatccgcgctattgaaaccgttttgccccgctatcgt
cagttatttgaaacccatgcgggcaatttagattggcgtaagcttgcggcgactagctat
caagagtcccattggaatccccatgctcgctcggcaacgggggtacgtggcatgatgatg
ttaactcagcctacggcaaaagaaataggcatcaccaaccgtttggatgcggaagaaagc
atccgcggcggcgcagcctatttgaacgatatgatcaatcgtttgccagaatccattccc
gagagtcaacgtatgtggtttgcactggcgtcctacaacataggatatgcccatgttgaa
gatgcgcgaaagctggctgaatcgatggaattaaatcccaatgcgtggcgagatttaaag
aaagtgctgccactgctgcaaaagcgtaagtactatcaaaaaacccgctacggctatgcc
cgtggcagtgaagccgtccattacgtcgacagtattcgccgctactacgacacattagtc
tgggtggataatcagtcgaaacagcaaaaccccgaggaagaaccgagcgatcttgcgtcg
gaagaacccgccattcccgctggaacattaagcccagaacaacctaagtaa
DBGET
integrated database retrieval system
