Shewanella baltica OS678: Sbal678_3217
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Entry
Sbal678_3217 CDS
T01725
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_3217
Enzymes [BR:
sbt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sbal678_3217
DNA repair and recombination proteins [BR:
sbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sbal678_3217
Prokaryotic type
Sbal678_3217
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADT95359
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All DBs
Position
complement(3727719..3729218)
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AA seq
499 aa
AA seq
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MTSVNDSMPVDSMRIEVQGNNALMWFRQDLRLADNQALSAACDWARENGVALKAIYIATP
TQWQRHDVAPIQLDFIERHINLLAQGLASLGITFELIQLDTFADVPAFISDYCQQQGISR
VFAGSEPEINEQQRDQACIQAGIPLVLTEEHCLLKPGTVLNLSGDMYKVFTPFSRKWREI
AARHAILPLPVPAPLGPVLTEPKPHLFNNVTKVSSELWAAGEGQAKRILSAFIQQKVQDY
KQDRDFPAIDGTSSISPYLAIGVVSPRQCVAALLHDFPEVIVDDTSPARTWLNELTWREF
YRHLLVAFPDLSKNYNFNRQADHVQWRNNQQEFAAWCEGRTGYPIVDAAMRQLNQTGWMH
NRLRMVVASFLTKHLLIDWRWGERNFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFN
PMSQSEKFDPDGSFIRKYLPELASWGIKQLHQPSTAQTPSLFDQPLFTKTAYPSAIVEHS
AARARALTVLGVLKKAAAQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagttaacgattcaatgccagtagattcaatgcgaatagaagtgcagggcaat
aatgcactgatgtggtttcgccaagatttacgccttgccgataatcaggcgctaagtgca
gcctgtgattgggcgcgggagaatggcgtggcacttaaggccatttatatcgctacgcca
actcagtggcaacgccatgatgtggcgcccattcagttagattttatcgaacgtcacatc
aatctgcttgcccaagggctggcgagtttggggattacattcgaattaattcagttagat
acctttgccgatgtgccagcgtttatcagtgattactgccagcagcaaggtattagccgc
gtgtttgcaggcagtgagcctgagattaacgagcaacagcgtgaccaagcctgtattcag
gctggtattcctctggtgctaaccgaagagcattgtttgcttaagccgggcacagtgctg
aacttgtccggcgacatgtataaggttttcaccccttttagccgtaagtggcgagaaatt
gccgcccgccatgccattttgccgcttccagttccggcgccgcttggacctgtgttgacc
gagccaaagccgcatttatttaacaatgtcactaaagtatcgagtgaactttgggctgcg
ggagaagggcaggcaaagcgtatactttcagcatttattcagcagaaagtacaggattat
aagcaagatagggatttccccgccatcgatggcaccagttcaatttcaccttatctggcc
attggcgtcgttagcccaagacaatgcgttgccgcgttgctgcatgacttccccgaggtg
attgtcgacgatactagcccagctcgtacttggttaaatgagcttacctggcgtgagttt
tatcgtcatttgctggtggcatttcctgacttatctaagaattataatttcaatagacaa
gccgaccatgtgcagtggcgtaacaatcagcaggagtttgccgcttggtgtgaaggtcgt
acaggctatccgattgtcgatgcggcaatgcgccagctcaatcaaacgggttggatgcac
aatcgtttgcgtatggtggtggcgagtttcctgacgaaacatctactgattgattggcgt
tggggcgagcgtaatttccgtcaaaagcttatcgatggtgacttagccgcgaataatggc
ggctggcagtggtccgccggttgtggctgtgatgcccagccttattttcgcatttttaat
cctatgagccagagtgaaaagtttgatccagatggcagcttcatccgtaagtacttacca
gagctcgcatcttggggaattaagcaattacatcaacccagtacagcgcagacaccgtcc
ttgtttgaccagccgttattcactaaaacggcttatccgagtgcgattgtcgagcacagt
gcagcaagagcaagggcattaaccgtattaggcgtattgaaaaaggccgcggcccaataa
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