Shewanella baltica OS678: Sbal678_3270
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Entry
Sbal678_3270 CDS
T01725
Name
(GenBank) DNA polymerase III chi subunit HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03030
DNA replication
sbt03430
Mismatch repair
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal678_3270
03430 Mismatch repair
Sbal678_3270
03440 Homologous recombination
Sbal678_3270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbt03032
]
Sbal678_3270
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_3270
Enzymes [BR:
sbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal678_3270
DNA replication proteins [BR:
sbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal678_3270
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal678_3270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF1496
Motif
Other DBs
NCBI-ProteinID:
ADT95412
LinkDB
All DBs
Position
3786627..3787130
Genome browser
AA seq
167 aa
AA seq
DB search
MTQVLFYLMPPVASIAKAKADSPVATANANPALCEMYLLACQLAQQAFVKQQWVYIHCQD
KQQAHAIDELLWQFEPSAFVPHNLKGEGPMTGSPVEIGFDRLGANKSRQVLINLADQAPP
FAVNFGHIIDFVANDDQHKAVARERYRQYRGLGVNLQTQDLATHPLN
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagtgctgttttatctcatgccgccagtggcatcaattgccaaagctaaggct
gattcacctgttgcaaccgcgaatgcgaaccctgcgctttgcgagatgtatcttctggca
tgccaactggcgcagcaggcttttgtgaaacaacaatgggtctatatccattgccaagat
aagcagcaagcccatgcgattgatgaacttttatggcagtttgagccaagtgcctttgta
cctcataaccttaaaggtgaaggcccgatgacgggatcgccggtagaaattggttttgat
cgcctcggcgccaacaaaagtcgccaagttctgattaatcttgcagaccaagcgccccca
tttgcggtaaactttggccacattatcgattttgttgccaatgacgatcagcataaagcg
gtcgctcgcgaacgttatcgacagtatcgcggcttaggggtcaatttacagacccaagac
ttagcaacacatccacttaattag
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