Shewanella baltica OS678: Sbal678_3430
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Entry
Sbal678_3430 CDS
T01725
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbt03016
]
Sbal678_3430
Enzymes [BR:
sbt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sbal678_3430
Transfer RNA biogenesis [BR:
sbt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sbal678_3430
Prokaryotic type
Sbal678_3430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADT95568
LinkDB
All DBs
Position
complement(3979091..3980056)
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AA seq
321 aa
AA seq
DB search
MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
GTKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRAIDFTEAQLLTALDFFRGETQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYARMVSLEQLEALVAQAHEQQIDPSVLLDPLL
LPMDTAVADFPEVNVPDAIAPYLMQGQAVRVPVNADLKTDELVRITLGDIRRFVGIGTMN
EDGLLAPKRLIVIHDEPAETD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccaaaaggtcgttttattgatgggatagtgctgctggataaatccact
ggcatgagttctaactttgcattgcaaagggtaaagcgcttttttaatgcgaacaaagca
gggcatacgggcgcactcgatccgttagcgacaggtatgttacctgtgtgcttaggcgaa
gggactaagttttcccagcatctgttagatgccgataaacgttatttggtcaccgcaaag
ctgggcgagcgaacggataccagtgattccgatggcgaagtggtgcaaacccgcgccatt
gattttactgaggcgcagttattaaccgcgcttgatttcttccgtggtgagactcagcaa
gtgccttctatgtattccgcgcttaaatatcagggccagcccctgtataaatatgcccgt
gaaggcattgaagtgccgcgcgaatctcgccctattacggtatttgagcttaattttatc
ggtcttgaaggcgatgagctgaccttagacattcattgttctaagggcacttatattcgc
actatcatagacgatctcggtgaaatgctcggttgcggcgcccatgtcatcatgttgcgt
cgcactcaagttgcacaatatccctatgcaagaatggtttccttagaacaacttgaagcg
cttgttgctcaagcacatgaacaacagatagatccgagcgtcttacttgatccgctgtta
ttacctatggatacggctgtggctgatttccctgaggtgaatgtgccagatgcaatcgcc
ccttacttaatgcaaggtcaggctgttcgggtccccgttaatgcagacttgaaaaccgat
gaactggtgcgtatcactttaggtgacattcgccgatttgtggggattggcactatgaac
gaagacggcctactcgcgccgaaacgactcatagtgatccatgacgagcctgcagaaact
gattag
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