Shewanella baltica OS678: Sbal678_3664
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Entry
Sbal678_3664 CDS
T01725
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03410
Base excision repair
sbt03430
Mismatch repair
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sbal678_3664
03430 Mismatch repair
Sbal678_3664
03440 Homologous recombination
Sbal678_3664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_3664
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sbal678_3664
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sbal678_3664
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sbal678_3664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
ADT95800
LinkDB
All DBs
Position
complement(4239690..4241414)
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AA seq
574 aa
AA seq
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MIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALSHECELVLKGLLRPETMKGLPEAAAL
IADAMQANKSILIVGDFDADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPEIVA
VAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQPDCP
FASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSLDAN
NRILVEAGLQRVRVGRCRVGITALLEVAKRNPTRIVASDFGFAVGPRLNAAGRLDEMALG
VETLLCEDMMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIALFQE
DWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSARSIKGLHMRDLLELVNTRHPGLI
IKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLEMAQ
LLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLHTWP
DATIHHARIVYKLDVNEYRGNFSLQLMVEQIEAM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
ttgatccataagatagtccgtcgcccaaccgttgatgatagccatttacctgctcatctt
tcgccgctattgaagcagctttacgctcgccgcggtgcgctcagccacgaatgcgaactt
gtccttaagggtctattaagacctgaaaccatgaaaggcttacccgaagctgcggcgcta
attgccgatgccatgcaggcgaataagtcgattttgatcgtcggtgattttgatgccgat
ggcgcgacctcaaccagcgtatgtatgctggcgctacggatgatgggcgcagttaaagtg
gactatttgatccccaatcgcttcgattacggttacggcttaagccctgaaattgttgcg
gttgcggcgtctaaacaggctgaaatgctgatcactgtcgataacggtatttcatcgatt
gatggcgttgctgcggccaaagcctttggtatgcaagtggtgattactgaccatcattta
cccggacacgagttgcctgctgccgatgcgatagtgaatccgaatcaacccgattgccca
ttcgcgagtaaatcgattgccggtgtcggtgtcgccttttatttgatgacagcattaagg
gctgaactgcgaacgcgaaactggtatcaaacgcgcggtattgctgagcccaatttaggg
acgctgctcgatatcgttgccctcggcacagtcgccgatgtggtatcgctagatgccaat
aatcgcattttagtcgaagcgggtttgcagcgcgtgcgagtgggccgctgccgtgtgggc
attactgcgctgcttgaagtggcgaagcgaaatccgacgcgtatcgtcgcatcagacttt
ggttttgcggtgggcccaaggcttaatgccgcaggccggctggatgaaatggcgcttggg
gtcgaaaccttactctgtgaagacatgatgtacgcgcggcgtatggcggccgagctcgat
gggttaaaccaagagcgtcgtgagctggaagtcggcatgcagcaggaagccttaaaaagc
cttgagcacttaaagctcaacgaagacgagttaccttggggtatcgcgctatttcaagaa
gattggcaccaaggcgtcattggtattttggcctcgcgcattaaagacaaataccacaga
cccgtgatcgcctttgccgatgccggcaatggtcaaattaaaggctcggcgcgttcaatc
aaaggcttgcatatgcgcgacctactcgagctggtcaacacgcgccacccaggactgatt
atcaaatttggcggccatgcgatggcggcaggcttatcactcaaagctggcagttttgct
acgtttgccaaagcctatgatgatgcggtgcgtgaactgctcaaacctgaactgctaact
ggcgagctgtggtcagatggtgaactcactcccacggaactgaatcttgagatggcccag
ttactgcgcaatgccgggccttggggacaagcctttgaagagccactgtttgatggctat
tttacgatagtgcagcaacgcctcgtcggcgagcgccatcttaagcttgtactcgaaacc
cagtgcggcactgtgatgctcgatgcgattgcttttaatgtggatttacacacttggccc
gatgcgaccattcaccatgctcgtatcgtttataagcttgatgtgaatgagtatcgcggt
aatttctcgctgcaactcatggttgagcaaatcgaagccatgtag
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