Shewanella baltica OS678: Sbal678_4045
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Entry
Sbal678_4045 CDS
T01725
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03420
Nucleotide excision repair
sbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal678_4045
03430 Mismatch repair
Sbal678_4045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_4045
Enzymes [BR:
sbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal678_4045
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal678_4045
MMR (mismatch excision repair)
Other MMR factors
Sbal678_4045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADT96174
LinkDB
All DBs
Position
complement(4671870..4674038)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQV
RLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPLEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQDRFKHILVDEFQDTNAIQYAWIRVLAGQT
ANVMIVGDDDQSIYGWRGAQVENLHRFLKDFPSATTIRLEQNYRSKGNILKASNALIANN
PERMGKELWTDEADGDPISLYCAFNEMDEARFIVGRINDWHEKGGNLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYLRLINNKDDDAAFERVVNTPPRGIGD
RTLDILRSTARQHELTLWQASMRLLDEKVLAGRAANSVRGFMDLIMTMREDTQDMVLYRM
ADTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNGFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS
TQKSAATNDTGFNVGQRVNHPKFGEGKVTNFEGSGAQGRVQVSFTDFGSKWLVVAYARLE
AL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctgaatgataagcagcgcgaggctgtcgcggca
ccgcaatctagcatgttagtgttggcgggcgcgggcagtggtaaaactcgggtgttgacc
caccgtattgcgtggctgatgcaggttgaacagcagagtccttactcgattcttgcggtg
acatttaccaataaagctgcggctgagatgcgcgagcgagttgaaaaagtcgctggcacc
aatatgggccgcatgtggattggcacgttccacggcttggcgcatcgcttgttacgcact
cacttccaagatgcgggtttaccgcaaagcttccaaatcctcgattctgacgatcaagtg
cgtttgatcaaacgtattcttaaaagcctgaatttggatgagaaacaatatcctccacgc
caagctcagggttatatcaatggtaaaaaagaccaaggattacgccctaaacatatcgat
gcgggcggttttccgcttgagcaaaatctgttaaaaatctatcaggtttaccaagagtct
tgtgatcgcgctggtttagtcgattttgccgaaattctattacgcgcccatgagttatgg
ctcaataagccgcacttgttggcccattatcaggacagatttaagcatattttggtggac
gagtttcaagataccaacgcgatccaatatgcgtggatccgtgtgctcgccggtcaaact
gccaatgtgatgatagtcggtgatgacgaccaatcgatttacggctggcgcggcgctcag
gttgaaaacttacatagattcttaaaagatttcccgagtgcgactacgattcgtctcgaa
caaaactatcgctctaagggcaatattcttaaagcttccaacgccttaatcgccaataac
ccagagcgtatgggcaaagagttgtggacggatgaagccgatggcgatccgatttcgctt
tattgtgcttttaatgaaatggacgaggcgcgctttattgtcggtcgcattaatgattgg
cacgaaaagggcggcaacctcagtgattgtgcgattttatatcgttctaacgctcagtcg
cgggtattagaagaagccttattacacaaaggtttagcctatcgcatctatggcggttta
cgcttcttcgagcgccaagaaattaaagatgctatgggttacctgcggctgatcaataac
aaagacgacgatgcggcgtttgagcgcgtggttaacacgccgccccgtggcattggcgat
cgcactttggatattttgcgctccacggcgcgccagcatgagttaaccctgtggcaggcg
agtatgcgtttgctcgacgagaaagtactcgcgggccgcgcagcaaattctgtgcgtggt
ttcatggacttaatcatgacgatgcgtgaagacactcaagatatggtgctgtatcgcatg
gctgatactgtgatccaagcttcgggtcttaaggccatgtatgaggccgaaaagggtgaa
aaagctcacgctagaatcgaaaacttagaagaactcgtcacagcggcacgtaccttcgaa
atgccagaagagctagaggacatgggcgaacttaacggttttctctcccacgcggcgctc
gaagcaggcgaaggccaagccgatgcctttaccgatgcggtgcagctaatgacgctgcat
tctgccaaagggctagagttcactatggtgttcatggcgggtgtcgaagaagggatcttc
ccgagtaaaatggcgctcgaagagggcgatagactcgatgaagaacgccgtctctgctat
gtgggcatgacccgcgcgatggaaaaactctacattacctatgcggaatcgcgccgtatt
tatggccgcgaagattacgccaggccatcgcgttttatcaaagagatcccaccgcaatat
gtggatgaaatccgcctcaaagcgcaggtttcaaccccaatggcgaataatcgttttagc
actcaaaagtcggctgccacaaacgatacaggttttaacgtcggccaacgagtcaatcac
cctaaatttggtgaaggcaaggtgaccaactttgagggcagcggtgcccaagggcgcgtg
caagtcagctttactgactttggcagcaagtggttagtcgtggcttacgctcgtttagaa
gcgctgtga
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