Shewanella baltica OS678: Sbal678_4123
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Entry
Sbal678_4123 CDS
T01725
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt00300
Lysine biosynthesis
sbt00470
D-Amino acid metabolism
sbt01100
Metabolic pathways
sbt01110
Biosynthesis of secondary metabolites
sbt01120
Microbial metabolism in diverse environments
sbt01230
Biosynthesis of amino acids
Module
sbt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sbal678_4123
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sbal678_4123
Enzymes [BR:
sbt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sbal678_4123
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADT96251
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All DBs
Position
complement(4770750..4771994)
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AA seq
414 aa
AA seq
DB search
MDHFLYQQNALHAEGCQVADLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK
ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY
CFNVESSAELELLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI
VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYDAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVVPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD
LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccaacaaaatgccctgcacgccgaaggctgccaggttgccgat
ttagctcaaacctatggcacaccgctgtatatctattcccgcgccacgctagagcgccat
tggcatgcttttaataatgccgtggcagatcatccacatttgatttgttacgcggttaaa
gccaatgcgaacttggctgtactgaatgtgctggcacgtttaggcagtggttttgatatc
gtgtcgggcggtgagttagcaagagtgatggaagcgggcggcgatcccgccaaagtggtg
ttctctggcgtgggtaaaactgcggctgaaatggaacaggcacttaatctgggcatttat
tgctttaacgttgaatcgagcgctgagcttgagctgttaaatctggtcgcaggtcgttta
ggtaaagtcgcgcctgtgtccctgcggattaatcccgatgtggatgcgggaactcatccc
tacatttcgactggccttaaagaaaacaaattcggtattgctatggatgaggctgaaatc
gttttcgcccgtgcccatgcgttgccacatttaaaagtgaaaggtgtcgattgccatatc
ggctcacaactgactgaaatcaaaccattcctcgatgcgatggatcgtatgcttgcgtta
atcgaccgtttggccgagcagggtattgttattgagcatttcgatgtgggtggtggttta
ggggtgacctatgatgccgaaacgccgccgcatcctgatgtgtatgccgccgccatattg
gcgcgtttgggcgaccgtcaactgaagctaatcttcgagccgggccgtgcgattgccgcc
aatgcggggatttttgttactcaagtgctgtatcttaaagaaaacagcgacaaacgtttt
gcgattgtcgatggcgcgatgaatgacttgattcgtcccgcactctacagtgcatggcaa
aatattatcccagtcgtgccaagggactcagaggcctatgagtttgatattgttggccca
gtgtgcgaaaccggtgactttttaggtaaaaatcgccagctcgcgttagccgcgggtgat
ttactggcggtgcgttcgagtggtgcctatggttttgccatggcctctaactacaacacg
cgtcctcgtgcggctgaagttatggtggatggtgagcaggctttcttagtgcgtgagcga
gaaaaattgtctcagctctggcaaggtgagcaactcctgccgtaa
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