Shewanella baltica OS678: Sbal678_4514
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Entry
Sbal678_4514 CDS
T01725
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03030
DNA replication
sbt03410
Base excision repair
sbt03420
Nucleotide excision repair
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal678_4514
03410 Base excision repair
Sbal678_4514
03420 Nucleotide excision repair
Sbal678_4514
03440 Homologous recombination
Sbal678_4514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbt03032
]
Sbal678_4514
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_4514
Enzymes [BR:
sbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal678_4514
DNA replication proteins [BR:
sbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sbal678_4514
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Sbal678_4514
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal678_4514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
ADT96637
LinkDB
All DBs
Position
5237259..5240024
Genome browser
AA seq
921 aa
AA seq
DB search
MPTVAKNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLTRYQPSHIAV
VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEADDVIGT
IARQASLENRAVLISTGDKDMAQLVDENVTLINTMTDTIMGPEEVAIKFGVGPDRIIDLL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVSNLLAEPEKVAELGFRGSKTMAAKIIENA
DMLKLSYELATIKTDVELEQDWHELTIKPADKDELIKCYGEMEFKRWLAEVLDNKITANT
SIDAASETQEDSTPVEAIATQYDCILTEAELDAWIAKLKEADLMAVDTETTSLDYMVAEL
VGISFAVEAGKAAYLPLTHDYVGAPTQIDKTVALEKLRPLLEDPKLKKVGQNLKYDISIL
ANAGIKLQGVAFDTMLESYVFNSVASRHDMDGLALKYLGHKNISFEEIAGKGAKQLTFNQ
IPLETAAPYAAEDADITLRLHQHLWPRLEKEAELAAMFTEVELPLIQVLSDIERQGVLID
SMLLGQQSDELARKIDTLEEKAYDIAGEKFNLGSPKQLQVLFFEKLGYPITKKTPKGAPS
TAEEVLVELALDFPLPKVILEHRSLSKLKSTYTDKLPLMVNAKTGRVHTNYHQANAATGR
LSSSEPNLQNIPIRTEEGRRIRQAFIAPDGRKILAADYSQIELRIMAHLSQDAGLLKAFA
EGKDIHRATAAEVFGTDFDEVTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQTYI
DTYFARYPGVLRYMEETRAGAADLGYVSTLFGRRLYLPEIRDRNAMRRQGAERAAINAPM
QGTAADIIKKAMINIAQWIKTETQGEITMIMQVHDELVFEVDADKAEALKKTICTLMAQA
ADLDVELLAEAGIGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgtcgctaaaaacccacttgtgcttgtggatggatcttcttatttatatcgc
gcttattatgcgcctcctcacctgacaaactcaaagggcgaagcaaccggtgccgtttat
ggcgtagtgaatatgttacgcagcttgctgactcgctatcagccgagccatatcgcagtc
gtgttcgatgccaagggcaaaaccttccgcaatgacatgtacagcgagtacaaagcacag
cgcccaccaatgcctgatgacctacgttcgcaaatcgaacctttacaccgcattattcgc
gcactgggtttaccactgatttcgatttccggcgtcgaagccgatgacgtgatcggcact
attgctcgccaagccagtttagaaaaccgtgcagtgcttatcagcactggcgataaagac
atggcgcagttagtcgatgagaacgtcacgctcatcaacaccatgacagacaccataatg
ggcccagaagaagtcgcgattaaatttggtgttggtccagaccgtatcatagatttgctc
gcgctgatgggcgacaaggccgacaacattcccggcttacccggcgttggtgagaaaact
gcgctcgctatgctcacaggagccggcagcgtgagtaatttattagcggaacccgaaaaa
gtcgccgagctcggctttaggggttctaaaaccatggcggcgaagatcattgaaaatgcc
gatatgctcaagctttcttacgaactcgccaccattaaaaccgatgtcgaacttgagcaa
gactggcacgaactcaccatcaagcccgcggacaaagatgaactgatcaaatgctacggc
gagatggagtttaagcgttggttagccgaagtcttagataacaaaatcactgcaaatacc
tcaattgatgcggcatccgagacacaagaagactcaactccagtcgaagcgattgcaacg
cagtacgactgcattctcacggaagccgaattagacgcttggattgcgaagcttaaagaa
gccgacttgatggcggtagataccgaaaccaccagcttagattacatggtagcggaatta
gtcgggatctccttcgccgttgaggcaggaaaagccgcttatctgcctttgacccatgat
tatgttggcgcaccgactcaaatcgataaaaccgtcgcgctagaaaaactgcgtccactg
cttgaagatccaaaactgaagaaagtcggtcaaaatcttaagtacgacataagtatctta
gccaatgcgggaatcaaactgcagggcgtcgctttcgacactatgctcgaatcctatgtc
ttcaactcagtagcttcgcgccatgatatggatggcttagcgctcaagtacttaggccat
aagaatatcagctttgaagaaatcgccggtaaaggtgcaaaacagctgaccttcaaccaa
attccactggaaacggctgcgccttatgcggccgaagatgccgacatcaccctacgttta
caccaacatttgtggccaagactcgaaaaagaagcagaactggccgctatgtttaccgaa
gtcgaattgccgctgatccaagtattgtcggatattgaacgccaaggggtattaatcgat
agcatgttactcggccaacaaagcgacgagctagcgcgtaaaatcgataccttagaagaa
aaagcctacgacattgccggtgagaaatttaaccttggctcgcctaagcaactgcaagta
ttgttttttgaaaagctaggttatccgatcaccaaaaagactcccaagggcgcaccatca
accgcagaagaagtgttggtcgaattggcattagatttccctttgccaaaggtgatcctc
gaacatcgcagcctatctaaattaaagagcacttacacagataaactgccactcatggtc
aatgctaaaacgggtcgtgtgcacactaactatcatcaggccaatgcggcaacaggacgc
ttatcatcgagcgagcctaacctgcagaatattcctatccgcaccgaagaaggtcgccgt
attcgccaagcctttatcgcacctgatggtcgtaaaattttggcagccgactactcgcaa
atcgaactgcggatcatggcacatttatcccaagatgccggcttactcaaagccttcgcc
gagggcaaagacattcacagagctacggctgccgaagtgtttggcacggactttgatgaa
gtaaccacagaacagcgtcgccgcgccaaagcggttaacttcggcttaatttacggcatg
tcagcctttggtttagcgcgtcagctcgatatcccgcgccatgaagcgcaaacctatatc
gacacctactttgcccgttatccaggcgtattacgttatatggaagagacgcgtgcgggg
gctgccgacctaggttatgtatcgactctgtttggtcgtcgcctctacttgcccgaaatc
cgtgatcgtaacgcgatgcgccgccaaggtgctgaacgtgctgcgattaatgccccaatg
caaggcacggctgccgacatcatcaaaaaggccatgatcaatatcgcccagtggataaag
acagaaacccaaggcgaaatcactatgatcatgcaggttcacgatgaattggtgtttgaa
gtcgatgcggataaagcagaagcgcttaaaaagacaatctgcactttaatggcacaagcc
gccgatctcgatgttgaactacttgccgaagcgggcattggtaataactgggatgaagct
cactaa
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