Sphaerochaeta globosa: SpiBuddy_0021
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Entry
SpiBuddy_0021 CDS
T01439
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbu03009
]
SpiBuddy_0021
Enzymes [BR:
sbu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
SpiBuddy_0021
Ribosome biogenesis [BR:
sbu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SpiBuddy_0021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ADY11867
UniProt:
F0RX17
LinkDB
All DBs
Position
complement(22116..22907)
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AA seq
263 aa
AA seq
DB search
MRQLVLPRSFDGEPLLELEGKESQYLTRVLRLQIGQQILGLDGQGRKFLLTLTEIKNQSC
TLSCKLVEPGMQVETTDTLPSYQGPYPNLVLLQCLCKGKKEEQIFRQATEIGATTLALVS
SRYCVTDLSDKKDKAVRARFDRLEAQIKEALQQSGSPIATNLVPQVLDLRDVPSWWDGQG
LAIFFHQSTRSEEQQTLTSLLKDHPLDKPVCVLIGPEGGFSDEECTFLEKEGFKPVVLKT
NILRSETAGIYALAAIQVLLTQS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagttagttcttccccgttctttcgacggggagcctttgttggagctggaaggc
aaggaaagtcagtatctgaccagagtattgcgtttgcagatcgggcagcagattcttggg
cttgacgggcaaggccggaaattcctgcttaccctcactgagatcaagaatcaaagctgc
accctctcctgcaagctcgttgaaccgggtatgcaggtagagacaaccgataccctgccc
tcttaccaaggcccctatccaaaccttgtactgctgcagtgtctgtgcaaaggaaagaaa
gaggaacaaattttccggcaggctactgagatcggggcaacaacgcttgccctggtcagt
agcaggtattgcgttaccgacctatcagataaaaaagacaaagctgtacgtgcccgtttc
gaccggcttgaagcccagattaaggaagctcttcagcaaagcgggtcccccattgcgacc
aaccttgttccccaagtgttggacttacgcgatgtaccttcctggtgggacggccaaggg
ctggccattttctttcaccaaagcactcgttctgaagagcagcagacgctcacttccttg
ctcaaggaccatccactggataagccggtatgtgtcctcatcggccctgaagggggtttc
agtgatgaggaatgcacgtttcttgagaaagaagggttcaaacctgtcgttttgaagacc
aatatcctccgaagtgagacagccgggatatacgctcttgcagccatacaagtgcttctc
acacaatcataa
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