Sphaerochaeta globosa: SpiBuddy_0137
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Entry
SpiBuddy_0137 CDS
T01439
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbu03009
]
SpiBuddy_0137
Enzymes [BR:
sbu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SpiBuddy_0137
Ribosome biogenesis [BR:
sbu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SpiBuddy_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
PrmA
Methyltransf_15
Methyltransf_4
N6_N4_Mtase
UPF0020
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_32
Methyltr_RsmB-F
PCMT
Ubie_methyltran
2-ph_phosp
FtsJ
Methyltransf_12
MethyltransfD12
N6_Mtase
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
ADY11980
UniProt:
F0RXD0
LinkDB
All DBs
Position
157895..159067
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AA seq
390 aa
AA seq
DB search
MKRYAKCPLARTCGACQLMDYSYSKQLEMKMAYLEDLLGQFGPIAPIQGMDDPTSYRTKV
QATFGYDWKDSLVSGIYQEGTHLLVPIRTCMVQHPLADSILKTIRNLATRFQITAYDEDE
GYGYLRHVLIKISRKTNEAMVVLVCAQWPIPSSDNFIAALKQQHPEITTIALNMNREQTS
MVLSEIPIKVLWGKGYIEEELCSLTFRISHSSFFQVNVEQAQVLYTLAMRMAQIDNDDVV
VDAYCGTGTIALIAAKEGAKQVIGIESNEQAVEDAKLNAERNNLTNAEFICADASAHLKE
MSKAKQSCDVLFLDPPRSGSDERFLAAAIRLAPKRIVYISCNPKTLERDLRYLLRFSDYE
VSGIQPVDMFPHTEHLETVVLMTRRFDLDN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttatgcaaaatgtcctttggcccgcacctgcggcgcctgtcaattaatggat
tattcctactccaagcagttggagatgaaaatggcttatttggaggacctgctgggccag
tttggtccaattgcccccatacaaggtatggacgatcccaccagctatcgcaccaaagtc
caagctactttcggctacgattggaaagatagcctggtcagcggcatctatcaggagggt
acccacctgttggtacccattcgtacgtgcatggtgcagcacccgcttgctgacagcatc
ctcaagacaatccgcaacctagccacccggttccagatcaccgcctatgacgaggatgaa
gggtatggctaccttcgccatgtcctgatcaagatcagccgcaagacgaatgaggccatg
gtggtcctggtatgcgctcagtggccgatcccctcatcggataatttcattgcagcactg
aagcagcagcatcctgaaattaccaccatcgcactgaatatgaatcgcgaacagaccagc
atggtactcagtgagattcccataaaagtcctgtggggaaaaggctacattgaggaagaa
ctctgctctcttaccttccgcatctcccactcctccttcttccaggtcaatgtcgagcag
gcccaagtcctctatacgcttgctatgcgcatggcacagattgacaacgatgacgttgtt
gtggatgcgtattgtggtacgggaaccattgctttgatagccgcaaaagaaggtgcaaag
caagttattggtatagaatcgaatgagcaagctgtcgaagatgccaaattgaatgctgag
cgcaacaacctgaccaatgcagaatttatctgtgccgatgcctcagcccacctcaaggag
atgtccaaggcaaagcagagctgtgacgttcttttcctcgatccaccacgcagcggtagt
gacgaacgctttttggcagcggccatacggcttgctcccaagcgcattgtctacatttcc
tgcaatcccaaaacgctggaacgagaccttcggtacctactcaggttcagtgactatgaa
gtcagtggcatccagccggtggatatgttcccgcataccgagcatcttgagactgtggtc
ttgatgactagaagattcgacctggataattaa
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