Sphaerochaeta globosa: SpiBuddy_0403
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Entry
SpiBuddy_0403 CDS
T01439
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17241
alpha-1,4-digalacturonate transport system substrate-binding protein
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SpiBuddy_0403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbu02000
]
SpiBuddy_0403
Transporters [BR:
sbu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
SpiBuddy_0403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF6520
Motif
Other DBs
NCBI-ProteinID:
ADY12238
UniProt:
F0RXW1
LinkDB
All DBs
Position
complement(437416..438672)
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AA seq
418 aa
AA seq
DB search
MRKIIVSLMILLLATTMVFAAGTKEEGAKKEVTLSVLWFNDANESDVFLKTMDDYLKANP
HVKLDLQIVAYSEYDQKLKLMISGGNPPDVARITTNTLSVVVDSLEPIENHVADVEAVKK
QYLPSMVAFATNKEGKFIAYPTEATANGMLVNKTAFDKAGIDVDKVSKTWTWSEWETIIK
QVVAANPSMKYGLAVDFTPHRFSTLMYQWNGRFLNEDQSNIKFNNPGTIATLKWFKGLHD
QGLLPKSVWLGSENPAELFQAGLVAGHIGGSWNINTYNKNVKDFEWKAVKMPKGAINSSV
PGGKFVASFKGAKNQDEAFKLMAAFTDKAHNEMYSRDTFNIPSRNDAQVSYPSNSGDFEV
FLEELKVTPAYTANEWKNTSLSKVTTYIREQIVEVLLGNITAEQAVANVDNKGASFFK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattatcgtatccctgatgattctgctactcgccacaaccatggtgtttgca
gcaggaaccaaggaagagggagcaaagaaagaggtgactctttcggtactctggttcaat
gatgccaatgagtcggatgtctttctgaagactatggatgactacctgaaggccaacccc
catgtgaagctggacctacagattgttgcctacagtgagtacgaccagaagctcaagctg
atgatcagcggaggcaatccacccgatgtcgctcgtatcaccaccaataccctttcggtg
gtcgtcgatagcctggagcccattgagaaccacgttgctgacgttgaggcggtgaagaag
cagtacctgccctccatggtagcctttgccaccaacaaggaaggcaagttcattgcctac
cccactgaagctacagcaaacggcatgttggtcaacaagaccgccttcgacaaggccggc
atcgatgtggataaggtcagcaagacttggacttggagtgaatgggaaaccatcatcaag
caggttgttgcagccaatccgagtatgaagtacggccttgcagtcgacttcaccccgcac
cgcttctccaccctcatgtaccagtggaacggccgcttcctcaatgaggaccagtcgaac
atcaagttcaacaatcccggaaccattgctaccttgaagtggttcaagggcttgcatgac
cagggtctgttgcccaagagcgtatggctcggttccgagaacccggctgagcttttccag
gcaggcttggttgccggtcatatcggcggcagctggaacatcaacacctacaacaagaac
gtgaaagactttgagtggaaagcagtaaagatgcccaagggcgcgattaactcctccgtc
cccggcggtaagttcgttgcctccttcaagggtgcaaagaaccaggatgaggcattcaag
ttgatggcagcatttaccgacaaggctcacaatgagatgtacagccgcgacaccttcaac
attccttcacgcaacgatgcacaggtttcctatccttccaacagcggcgactttgaggtc
ttcctcgaagagctgaaggtcaccccggcctataccgccaacgagtggaagaataccagc
ctgagcaaggttaccacctacatccgcgagcagatcgttgaagtactgcttggcaacatc
accgccgaacaggctgtggccaatgttgacaacaagggtgcatcattctttaaataa
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