Sphaerochaeta globosa: SpiBuddy_0815
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Entry
SpiBuddy_0815 CDS
T01439
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03030
DNA replication
sbu03410
Base excision repair
sbu03420
Nucleotide excision repair
sbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SpiBuddy_0815
03410 Base excision repair
SpiBuddy_0815
03420 Nucleotide excision repair
SpiBuddy_0815
03440 Homologous recombination
SpiBuddy_0815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbu03032
]
SpiBuddy_0815
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_0815
Enzymes [BR:
sbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SpiBuddy_0815
DNA replication proteins [BR:
sbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SpiBuddy_0815
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SpiBuddy_0815
NER (nucleotide excision repair)
GGR (global genome repair) factors
SpiBuddy_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
RNase_H_2
SMAP
Motif
Other DBs
NCBI-ProteinID:
ADY12642
UniProt:
F0RUZ1
LinkDB
All DBs
Position
863690..866536
Genome browser
AA seq
948 aa
AA seq
DB search
MDELFSNQDFDQEKLASEAKDRVLSVPPKPQEPKVVPPTKLSSQKKLYIIDGYSLIYRSF
FGFFANPIRDTQGNNVSAVYGFFSTLLKLIRENNPDYLVVALDSMGPTFRHTMYEPYKAN
RDAAPEELHTQVPLIQNILTALKVPTIAMPGFEADDIIATLSEEATRHQIDTIMFTGDKD
LLQLVDEHTFALRPAKKNEKFYRLMGCKEVEEEYGIKPSQIVDYLSLLGDSSDNVPGVKG
IGEKGAAKLLQQFGSLEGIYSNLKLVAPGLQKKLAEGVENAKLSKRLVELKRDLFTVDTF
DTEQYLVSDVDYDAAIPLFQEIGMRSIIKELGRVSSGESSSPIPAKVEAKSETKQAVYEA
VTDVTQIKNLFEQAIKAGGVMAFDLETTGLDEMLAQVIGFSFCWEEGKSYYVPLVHETKE
LVDREQVRSLLEEYLGSGRLSLVGQNIKYDYKVLRQWGIMPKNIYFDTMVAAWLLDSTSV
FNMDYLAEKYLDYKTVHYTDIVPKDKLLSDIPLEQAVFYGAEDADVTFRLYKLFSELLGA
RNLRSLLDEVEMPLLVIIANMELAGIYLERKLIEPLSAEFEGRIDAIRNQIFAICGHAFN
LNSPQQLQEVLFVERNIPTGAKTRSGFSTSTDVLEPLRDDYPEVELILQYRTLNKLKTTY
IDKLPLQINEKTHRIHPSFAQTGTETGRLSCKDPNLQNIPVRTEEGRRIRSAFVPQAGHV
FLSADYSQIELVVLAHMADDPGLKGAFAAGIDVHSSTASLIFDVPLDQVTPVQRRIAKTI
NFGVMYGMGTHSLAMDLKIPHSEAKQFIDQYFERYSSVRSFVEATKTMSQQVGSVSTLLG
HVRTITEINSRSAVERAKAERIAVNTVIQGSAADIVKLAMLRVDSLLKQKKLGARLLLQI
HDELIFEVPEAEIEETKAVVKEALEHAVKLSVPLRTSIEVGSNWGDIH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattgttttcaaatcaggattttgaccaggagaaacttgcctccgaagccaag
gatcgggtattgtccgtacctcccaaaccgcaggaaccgaaggtcgtccctcccacgaaa
ctcagcagccagaaaaagctatacatcattgacggctatagcttgatctatcgttcgttt
ttcggctttttcgccaaccccatccgtgatacccaaggcaataatgtatcggctgtctat
ggattcttttccaccttgctcaagttgatccgcgagaataatcccgactacttggtagtc
gcgctggacagcatgggtccgacattccgccataccatgtatgaaccatataaggccaat
cgtgatgcagcccctgaggaactgcacacacaggtccctcttatccagaacattctgaca
gccttgaaggttcccaccatagccatgccgggcttcgaggccgacgatatcattgcaacc
ctcagtgaggaggctacccgccatcagatagacaccatcatgttcaccggagacaaggat
cttctgcagctggttgatgaacatacctttgcccttcgcccggcaaagaagaatgagaag
ttttatcgcctcatgggatgtaaggaagttgaggaggagtacgggataaagccgtctcag
attgttgattatctatccttgcttggagactcttcggacaatgtgcccggtgtgaaggga
attggtgagaagggtgcggcaaagctgttgcaacagttcggctcgttggagggtatctat
tccaacctcaagctcgtggcaccggggctgcagaaaaaacttgcagaaggtgtggaaaac
gcaaagttgagcaagcgtcttgttgagttgaaaagggatttgttcaccgtcgacaccttc
gataccgaacaatacctggtaagcgatgtggactacgatgcggcaattcctttgtttcag
gagataggaatgcgcagcatcatcaaggagcttggaagggtttcctctggtgagtcctcc
tcgccgattcccgcaaaggttgaagccaagagcgagaccaaacaggctgtttacgaagct
gtaaccgatgtaacgcagattaagaacctgtttgagcaggcgatcaaggcggggggtgtc
atggctttcgaccttgagaccaccggtttggatgaaatgcttgcacaggtgatcgggttc
tctttctgctgggaggaaggcaaatcctactatgtaccgcttgtgcatgagactaaggag
cttgtagacagagaacaggtgcgttccctgctcgaggaatatcttggctcaggcagactt
tcattggttgggcagaatatcaagtacgactacaaggtgcttcgccaatggggaatcatg
ccaaagaatatctatttcgataccatggtggcggcctggcttctggacagtacttcggtt
ttcaacatggactatctcgctgagaagtacttggattacaagaccgtacactacacggac
atcgtgcccaaggacaaactgttatccgacattcccctcgagcaggctgtcttctacgga
gccgaggatgctgacgttaccttccggctttacaagctcttttccgaattgcttggtgcc
cgtaatctccgttcgttgcttgatgaggtagaaatgcctctgcttgtaatcatcgcgaac
atggaacttgcaggaatttatttggaacgcaagctcatcgagccgctatcggcggagttc
gaagggcgtatagacgcaataagaaaccagattttcgccatctgcggtcacgctttcaac
cttaattcgcctcagcagttgcaggaggtgctcttcgtagagcggaacatccccaccggg
gcaaagacccgttccgggttttccacctccaccgatgtactggaacccctgagggatgac
tatcccgaggttgagctcatcctgcagtaccggacgctgaacaagctcaagactacctat
atagacaagctgccgctgcaaatcaatgagaagacacatcggattcatccttcttttgcc
cagaccggcacagaaacaggaaggctttcctgtaaggatcccaacttgcagaatattccg
gtacgaaccgaggagggtaggcgtattcgctccgccttcgtaccgcaggcgggacatgtg
ttcctctctgccgactactcccagattgagttggttgttctggcccatatggccgatgac
ccaggcctgaaaggagcattcgccgccggtatcgatgtacacagctccactgccagcctc
attttcgatgttcctcttgatcaggtcacccccgtgcaacgcagaatcgccaagacaatc
aatttcggggttatgtacggcatgggaacccatagtctggcgatggacctgaaaattccc
cactccgaggcgaaacagttcatcgaccagtactttgagcggtacagctccgtacgttcg
tttgtggaagcgaccaagactatgtcccagcaagtcggctcggtttcgacattgctcggt
catgtgaggaccatcactgagatcaacagccgaagtgccgttgaacgggctaaagccgaa
cgcattgctgtcaataccgtcatccaaggaagtgcagccgatattgtgaagcttgccatg
cttcgtgttgattccctgctgaagcagaaaaagctgggagcacggttgttgttgcagatt
catgatgaacttatctttgaggttccagaagcggaaattgaagaaacgaaagccgttgtc
aaagaggctttggaacatgcagtcaaactcagtgttcctctgcgtacgagcattgaggta
ggcagcaactggggagatatccactga
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