Sphaerochaeta globosa: SpiBuddy_1312
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Entry
SpiBuddy_1312 CDS
T01439
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SpiBuddy_1312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbu03019
]
SpiBuddy_1312
03009 Ribosome biogenesis [BR:
sbu03009
]
SpiBuddy_1312
03036 Chromosome and associated proteins [BR:
sbu03036
]
SpiBuddy_1312
Enzymes [BR:
sbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SpiBuddy_1312
Messenger RNA biogenesis [BR:
sbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SpiBuddy_1312
Ribosome biogenesis [BR:
sbu03009
]
Eukaryotic type
90S particles
RNase
SpiBuddy_1312
Prokaryotic type
rRNA processing factors
SpiBuddy_1312
Chromosome and associated proteins [BR:
sbu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SpiBuddy_1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADY13137
UniProt:
F0RVS5
LinkDB
All DBs
Position
1416801..1417547
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AA seq
248 aa
AA seq
DB search
MESTLFMRAPAISSDRERELLVFIKDSKITISNLELLNLAFTHRSFANETSDSVDNNERL
EFLGDSVLGMCVADWLFRNFPAKAEGDFSKIKSVVVSEDSLAMIARQLSVDKYLLLGKGE
EFTGGRDKKALLADCMEALFAACYLDSGFEAAKSFVMLYLEQQIQAVLDDDYHRDYKTSL
QEYMQKRWRKVPSYTLVRKTGPEHDFTFFVEVDVNGQVFGPASGANKKQAEQMAAKLAYD
QLVKPNKD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacactcttcatgagagctcccgccatctcatcagatagagagcgggagctt
cttgtatttatcaaagacagcaaaattaccatctcaaaccttgagctgttgaaccttgcc
ttcacccatcgatcctttgccaatgagacatccgattcggttgacaacaacgaacggctt
gaattccttggggacagcgttctgggaatgtgtgtcgctgattggctttttaggaatttt
ccggctaaagcagaaggtgatttctcaaaaattaaaagtgtggtggtcagtgaagacagt
cttgcaatgattgcaagacaactttctgtagacaagtatctgcttctcggaaagggtgag
gaattcaccggtggcagggataagaaagcactgcttgccgactgcatggaagcattattc
gcagcttgttatctggacagtggttttgaagccgccaagtcgtttgtgatgctttatctc
gaacagcaaatccaggcagttttggacgatgattatcatcgcgactacaagaccagcctg
caggagtacatgcaaaagcgttggcgcaaggtaccttcctatacattggttaggaaaacg
ggacccgagcatgactttacattttttgttgaagtcgatgtcaatggccaagtattcggc
ccggctagtggggccaataagaaacaagcagaacagatggccgccaaacttgcgtatgat
cagctggtgaaacccaataaggattga
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