Sphaerochaeta globosa: SpiBuddy_1331
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Entry
SpiBuddy_1331 CDS
T01439
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SpiBuddy_1331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbu03019
]
SpiBuddy_1331
Enzymes [BR:
sbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SpiBuddy_1331
Messenger RNA biogenesis [BR:
sbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SpiBuddy_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Macscav_rec
Motif
Other DBs
NCBI-ProteinID:
ADY13156
UniProt:
F0RVU4
LinkDB
All DBs
Position
1443777..1445045
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AA seq
422 aa
AA seq
DB search
MLIRYKQDELGKTLPVANIYTQSEHKIPAHLLDKDALWAIKKLQASGAEAYLVGGAVRDM
MLGTIPKDFDIATSASPRQIQRLFWNARIIGKRFKLVHLVFKDKVLEVSTFRSGEEAMDG
NNNVFGSIDQDAKRRDFSINSFYYDPSTGQLLDFNHAMEDFKKKKISSIIDLDESFKEDP
VRMVRAIKYSVSTGFSLRWSVKMAIRKYSNELSRVSTSRLTEEVNKILASGHSCEIFNEL
KRYKLLVFMLPAFSIYSSYPQVQSSLKELDKQVLLAKQGKGSEVLLADMLKALVDPLIVF
TDEALTIDQRFKETFRQIKVLISPMTPSNYDIELASERLLCERGFKTPRNCVRVQRPANR
IPGRRPPLATAQRKARPEVSAEGAKKRRTRNRGPKKSTGSSANSQALNEQSVAQTSAEVH
DL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacgatacaaacaagacgaactaggaaagaccctgcctgttgccaacatctac
acccaatcggaacataagattccggcccacttgcttgacaaggacgctttatgggcaatt
aagaagctgcaagccagcggtgctgaagcctacctggtagggggcgccgttcgggatatg
atgttgggaaccatccccaaggatttcgatattgccaccagtgcatctccgcgccaaatc
cagagattattctggaatgccagaatcataggaaagcgcttcaagctggtgcacctcgtg
ttcaaggacaaagtcctggaggtctcaaccttccgtagcggagaggaagcgatggatggg
aacaacaatgtgtttggttccatcgatcaggatgcaaagcgccgagatttctccatcaac
agtttttattatgacccttccaccggacaattgcttgatttcaaccatgccatggaggat
ttcaagaaaaagaagatcagttccatcatagacttggacgagtccttcaaggaggacccg
gtacgaatggtgcgggctatcaaatattccgtttccaccgggttctcgctgcgttggagc
gtaaaaatggccatccgcaagtattccaacgaattgtcacgtgtatcgaccagtcggtta
actgaggaagtgaacaagattttggcaagcggtcacagttgcgaaatcttcaatgagctg
aaacggtataagcttctcgtctttatgctgcctgccttctccatctacagcagttatccc
caggtccaatcaagcctcaaggaacttgacaagcaagtactgcttgccaagcagggaaag
gggagtgaggtgttgttggctgatatgctcaaggctttagtggatcccttgattgtcttc
accgatgaagctttgaccatcgaccagcgtttcaaagagaccttcaggcagatcaaggtg
ctcatcagccccatgacgccttccaattatgacattgaactggcgagcgaacgcctgttg
tgcgagcgtggattcaagactcccagaaactgtgtccgagtacagcgtcccgccaatcgg
attcctggtcgcagacctcctcttgctaccgcccagcgtaaagcaaggcctgaagtatcg
gctgaaggtgcaaagaaacggagaaccagaaaccgggggcccaagaagagcacgggatct
tcagcgaattctcaagcactgaatgaacagagcgttgctcagaccagtgccgaggtgcat
gatctttaa
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