Sphaerochaeta globosa: SpiBuddy_1393
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Entry
SpiBuddy_1393 CDS
T01439
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbu03016
]
SpiBuddy_1393
Enzymes [BR:
sbu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SpiBuddy_1393
Transfer RNA biogenesis [BR:
sbu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SpiBuddy_1393
Prokaryotic type
SpiBuddy_1393
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADY13218
UniProt:
F0RZ11
LinkDB
All DBs
Position
complement(1509523..1510416)
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AA seq
297 aa
AA seq
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MGTNASILLINKKPGLTSFSSLNDIKRTIDPKVGHAGTLDKFARGLLVVLTGSMTRLNVL
FSTMDKTYRAEIQFGMETDTLDPEGQVIATAALPSFEAIQKAIPTFLGTIEQQPPQYSAL
HINGKRASDLARSGKEVEMAKRPITVYRFIPISYEQGILIADIHVSKGTYIRSLARDLGL
AAGSRAHLIGLERTSIGPFSLTEAVDAKETETLVASVSQTDERLSRVDSVSIFEIGEDEL
FRVANGAFPNSCKILRQSNNELFGALYSTDGVLRAVADMREGRLIAQIHPYRKEIVG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaacgctagcattcttctcataaataaaaaaccgggccttaccagtttttcg
tccctcaatgatatcaagcgtaccatcgatcccaaagtgggacatgctggtacgcttgat
aagtttgcccgtggactcttggttgttttaaccggaagcatgaccagattgaatgtgttg
ttttccaccatggataaaacctatcgggctgaaattcaatttggcatggaaaccgatacg
ctcgatccggaagggcaggtgatagcaacagcagctctccccagctttgaagcaattcaa
aaagccattccgacttttttgggcactatcgaacagcagcctcctcaatatagcgcgctt
catatcaatggaaaaagagcaagcgacctggcccgaagcggaaaagaagtggaaatggct
aaacgccccataaccgtatatcgctttattcccatttcctatgaacagggaattcttatc
gctgatattcatgtttccaaaggcacctatatccgctcgctagcccgtgatttgggtttg
gcagcaggcagtagagctcatctgattggcttggagcgtaccagtatcggcccgttctcc
ttaactgaggcagttgatgccaaagaaacagaaacccttgtagcttcagtctcacaaact
gacgaacgtctgagtcgggtggattcagtaagcatcttcgaaattggtgaggatgaactg
tttcgcgtggccaatggagcgtttcccaattcatgcaagatactacgacaaagtaataat
gagctgttcggggcactgtatagtacagatggggtgcttcgcgcagtcgcagatatgaga
gaaggacgacttatcgcccaaatccatccataccgcaaggagatagtagggtga
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