Sphaerochaeta globosa: SpiBuddy_1404
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Entry
SpiBuddy_1404 CDS
T01439
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SpiBuddy_1404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_1404
Enzymes [BR:
sbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SpiBuddy_1404
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SpiBuddy_1404
RecFOR pathway proteins
SpiBuddy_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
nSTAND3
Sigma54_activ_2
AAA_22
AAA_14
Mg_chelatase
TIP49
Sigma54_activat
AAA_3
RNA_helicase
ABC_tran
bpMoxR
NPHP3_N
AAA_18
TsaE
NB-ARC
AAA_17
AAA_28
AAA_33
AAA_PrkA
IstB_IS21
NTPase_1
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADY13229
UniProt:
F0RZ22
LinkDB
All DBs
Position
complement(1528079..1529140)
Genome browser
AA seq
353 aa
AA seq
DB search
MDTHESELHDLIQSSVVSTSFQQEADKQENILRPKMLKDFQGQQRLKDNLAVFVQAARER
KEPLDHTFLIGPPGLGKTTLASIIANEMGAEIRMTSAPALDKPKDLAGILTNVTEGSVFF
IDEIHRLKPALEEMLYIAMEDFEIDWVIGQGPAARTMRIPLPKFTLVGATTKAGSVSSPL
SSRFGITCHIEFYNEQELASIIARSAQIMDVQIDKKAIVQLARCSRGTPRIANRLLRRLR
DFAMVMGDGTVTVAVVDHGMERLGIDNNGLETQDRNILRTIIEFYDGGPVGAETLSISVG
EAIESLEDFYEPYLIQKGFLKRTPRGRMTTKKAYDLLGIPCKRNLDDNQGILF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacacacacgagtcggaattacatgatttgatacaaagctccgtggtatccacctcc
ttccaacaggaggcggacaaacaggagaatatcctcagacccaaaatgctcaaggatttc
caaggccagcagcgtttgaaagacaaccttgccgtctttgtccaagcagcccgtgagcga
aaggaaccgcttgatcatacctttcttatcggtcccccgggtcttggaaagaccaccttg
gcaagtattatcgccaatgagatgggtgctgaaatcaggatgaccagcgcacctgctttg
gataaacccaaagaccttgcaggaattcttaccaatgtaaccgaaggttctgtatttttc
atcgatgagattcatagactcaagccagctttggaagaaatgctctatattgccatggaa
gattttgagattgactgggttatcggtcaagggcctgccgcacggacgatgcgcattcct
cttcccaagtttaccttggtaggggctacaaccaaagccggttcagtttccagtcctctc
tcctcgcgattcggcatcacctgccatatcgaattctacaacgaacaggagctcgcctcg
attatcgccagatcggctcagatcatggatgtgcaaatcgacaagaaagccattgtccag
ttggcacggtgcagccgtggaactcctcgaatagccaatcgtcttttgaggcggctcagg
gacttcgccatggtaatgggtgatggaacggtgaccgttgcagtagtcgaccatggcatg
gagcgactgggcatcgacaataatggtcttgaaacacaggaccgaaatatattaagaaca
atcattgaattttatgacggaggaccggtaggggctgaaactctttcgatcagcgtaggg
gaggctatagaatctttggaagacttctatgaaccatatctgatacaaaaaggattcctc
aagcgtactccccgtggacggatgaccaccaaaaaagcctacgacctgctgggcattccc
tgcaaaaggaacttggatgacaatcaaggaatactcttttga
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