Sphaerochaeta globosa: SpiBuddy_1565
Help
Entry
SpiBuddy_1565 CDS
T01439
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03420
Nucleotide excision repair
sbu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SpiBuddy_1565
03430 Mismatch repair
SpiBuddy_1565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_1565
Enzymes [BR:
sbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SpiBuddy_1565
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SpiBuddy_1565
MMR (mismatch excision repair)
Other MMR factors
SpiBuddy_1565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_12
DEAD
DUF1878
PTP-NADK
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADY13390
UniProt:
F0RZA9
LinkDB
All DBs
Position
complement(1702234..1704186)
Genome browser
AA seq
650 aa
AA seq
DB search
MELNQQQMAAVVYDGPKRNILVNAGAGSGKTRTIIARAAHRITQGTQADRLLVLTFTNRV
AQELRHRLAHEVGSAGESVQMGTFHAFCLKVMSSLPKSFAISGLSIIDSDDQDNLMGMVR
KSLIKNLKGPKRGFPSSDHLLSLYSYSRNTLQNTDVYLHEQTDLDEEQIDLCMQIFSLYQ
QRKEERGYLDYDDLLIKFDEALTKKAALRHAVCTLFDEVLVDEMQDTNPIQFNILKHFSR
EQVNLFCVGDPAQSIYRFRGAEFTHMMEFGTIFSDSISFSLSLNYRSYQEILDVSNWLLS
CSSYPYQHTLEAIRGRSENLVRLEDFENQADECSWIADQVVGYQEQKIPLSDIMVLYRSS
FEAKTLEAELIRRKIPYRFIGGLVLTKSAHVRDVFALLRLVRNSSDDLAWMRYLQLFPRI
GEISAERIVNNVYSAGTASDSVIQTLESLLGKDHASVTALASAMKAGTTPLACIQAAIQQ
LSPLLAERYDHWKQRKQDLQLLEKVARTYHTLGQFIDDFTLEPMHGTQLSNESSDDALTL
ITVHSAKGTEAPICFVASAIPSQYPHSRSLGDLEAEEEERRVLYVALTRAKNELIITRYS
RARNSMWVDSSPAKSQAYFLESIPQNLILTTLHGYTSRGISSLSSLRDEF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcaatcagcaacaaatggctgcagttgtgtatgacgggccaaaaagaaatatt
ctggtgaatgccggggccgggagcggaaagacgcggaccattatcgctcgcgccgcccat
cgcattacccaggggacgcaagcggataggcttctggtcctcacattcaccaatcgtgtg
gcacaggagcttcgtcataggttggctcatgaagtcggatcagcaggggagtcggtgcag
atggggacgttccatgctttctgtctgaaggtcatgagttcacttcccaaaagttttgct
atcagtggcctatcgattatcgactctgatgaccaggacaatctgatgggcatggtgaga
aaatccctcatcaagaacctcaagggaccaaaaagaggatttcccagttccgatcacctg
ctttctctctactcgtacagtcgcaatacacttcaaaatacagatgtttatcttcacgag
caaacggatctggatgaagagcagatagacctctgcatgcagatattcagtttgtaccag
cagagaaaagaggaacggggctatctcgattacgatgaccttctgataaaattcgatgag
gcgttgactaagaaggcagcattgcggcatgcagtttgcaccctgttcgatgaagtgttg
gtggatgagatgcaggacacaaatcccattcagttcaatattctcaagcacttcagtagg
gagcaggtgaacttgttctgtgtaggagacccggcccaatcaatctaccggttccgggga
gccgagttcacccacatgatggagttcgggacaatattcagtgacagcatttccttttcc
ttgtcattgaattatcgcagttaccaagaaattctcgatgtttccaactggctgttgtcg
tgttcctcctatccttatcagcatactcttgaggcgataagaggcagaagtgagaacttg
gtccgtctcgaggattttgagaaccaagccgatgaatgttcgtggatagccgaccaagtg
gttggctatcaggaacagaagattcctctctccgatattatggtgttatatcgttcaagt
tttgaggccaagacgttggaagccgaattgatcagacgaaagattccctatcgcttcatc
ggtgggttggtgctgactaaatctgcccatgtacgggatgtgtttgctctgttgcgtttg
gtacgcaacagctctgatgatcttgcttggatgcgctatttgcagttgttccccagaata
ggggagatttctgctgagcggattgtgaacaatgtgtatagtgcgggcaccgcaagcgat
tcagtcatccaaacgttggagagcttgcttgggaaggaccatgcaagtgtcaccgctcta
gcgtctgcgatgaaagctggtaccacgcctctagcatgcattcaggctgcaattcaacag
ttgagtccattgttagctgagcgatatgaccactggaagcaacgcaagcaggatttacag
ttgttggaaaaagttgcccgcacctatcatacactgggacaattcattgatgatttcacg
cttgagccgatgcatggtacccagttgagcaacgagagcagcgacgatgcccttaccctt
atcaccgtccatagtgccaaggggactgaggctcccatctgttttgttgcttcagccatt
ccttcccagtatcctcactcccgctccctaggtgatcttgaagccgaggaggaagaacgt
agggttctctatgtagccttaaccagggcaaagaacgagttgatcatcaccaggtattcc
agagcacggaattctatgtgggtagattcttctcctgctaaaagccaagcatactttctg
gagtcaattccccagaacctgatactcacaaccctgcatggttatacaagcaggggtatc
agttcactgagtagcttgagggatgagttttaa
DBGET
integrated database retrieval system
