KEGG   Sphaerochaeta globosa: SpiBuddy_1644
Entry
SpiBuddy_1644     CDS       T01439                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sbu  Sphaerochaeta globosa
Pathway
sbu03410  Base excision repair
sbu03430  Mismatch repair
sbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SpiBuddy_1644
   03430 Mismatch repair
    SpiBuddy_1644
   03440 Homologous recombination
    SpiBuddy_1644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbu03400]
    SpiBuddy_1644
DNA repair and recombination proteins [BR:sbu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SpiBuddy_1644
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SpiBuddy_1644
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SpiBuddy_1644
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: ADY13469
UniProt: F0RWB2
LinkDB
Position
complement(1791303..1793432)
AA seq 709 aa
MVWNKSPVSAQEIRRLHEQYGLDMLSASILVRRGQVSSEQVKFFLEQELTYLHNPFLFDD
MEEVVDRINEAIVEGEKVCVVGDRDVDGITSTALLVQELRTMGLEVGYQLPEGDDPYGMT
LRGVDKAYEDKVTLMITVDCGISNFAEIAHAHSLGIDTIVLDHHISGDTLPPALAIIDPK
MPGSGYPFEHLAGCGVVAKVIWALRFSQTDFYREECILLHAQPGHDTIIIQAMRIQNLLV
IDRVIEEINPGLLPPSQSKALAFLSCGLPILVLDAQAELVQLKQAFSKKIDIHVVDMRSQ
MEAVMPVMKNKGLFALSNISRAIKYSPFGKDELQVLFTLFVAYCMKRYPGLDTEYESILD
LVAIGTVADLMPMEDENRIMVKRGLKVLAQGRRESLMPLFSMQNLLGKQLSTSDISWQIS
PVINASGRMGKPSVALEMMLSNDISQTEELAGQLLRLNKERQKLGEEAWDRMLKMAKDSF
EATGSKLVVVEDSTLSRGITGVMASRLLKQFNAPAIVLATVAEGRVSASMRSPDSFNARD
FLSRFSDLFLDFGGHACAGGFSMDISQLEIFKKRVMDEIDSMDCLPEEVAEINIDCTLPE
AYMTPDIIKVVEFFEPYGEKNTPLVFLMEGAVIENIQIMNNKNGSVQHVKMTLAFGEYKW
PALYWNAADRIGKDFDVGTSVDIAFRLGRNYFRNQETLQITILDLKPSN
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggtttggaataagtctcccgtctccgctcaggagatacggcgtttgcatgaacagtat
ggtctggatatgctcagtgcatccattctcgtcagaagaggacaggtctccagcgagcaa
gtaaagttttttttggagcaagagttaacgtatttacataatcccttcctcttcgatgac
atggaggaagtggtggatcgcatcaatgaagcaatcgttgagggcgagaaggtatgtgtg
gtcggggaccgcgatgtggatgggattaccagcaccgccttgttggtgcaggaactcagg
accatggggcttgaggtcggctatcagttgcccgagggagacgatccctacggcatgacc
ctgcgtggtgtggataaggcatacgaggacaaggtgacgttgatgatcactgtcgactgc
ggtatttccaacttcgcagagatcgcccatgcccatagccttggaatcgacacgattgta
ttggaccaccacatcagcggcgatacgctgcccccggccttggccattatcgatcccaaa
atgccgggttcggggtatcccttcgagcatctggccggttgtggggtggtagccaaggta
atctgggctctacgcttcagccagactgatttctaccgggaggaatgcatcctgcttcac
gcccagcctggacacgatacaattatcatccaagcgatgcgtatccaaaacctgttggtc
atcgatcgggtgatagaagaaataaacccgggtttgctgcctccttcccaaagcaaggct
ttggcctttctttcgtgcggcttgcctattttggtactcgatgcccaagcagaattggtg
cagctgaaacaagcattctccaaaaaaattgatattcatgtggtggatatgcgttcacaa
atggaagctgtgatgcctgtcatgaagaacaagggtctgttcgccctttccaatatcagc
agggccatcaagtactctcctttcggcaaggatgagctgcaggttctctttaccttgttt
gtagcctattgcatgaagcgctatcccggtctggatactgaatatgagtcgattcttgac
ttggttgccattggtaccgttgcagatcttatgccgatggaggatgagaaccgcataatg
gtcaagcgtgggttgaaggttttggcccaaggtagaagagaatctctgatgcctctgttc
tccatgcagaaccttcttggaaaacaactttcaaccagcgatatctcctggcagatcagt
ccagtcatcaatgcctccggaagaatggggaagccatccgttgcgttggaaatgatgctc
agtaacgatatttcccaaacagaggagctggccggtcaactcctcaggctcaacaaggag
cggcagaagcttggagaggaagcctgggatcgaatgctcaaaatggcaaaggacagcttt
gaggctaccggctccaagctggtggttgttgaggattccacgttgtcacgagggattacc
ggtgttatggcaagtcggctgcttaagcagttcaatgctcctgccatcgtacttgcaacg
gtagcggagggaagggtcagtgcttcgatgcgaagcccggactcgttcaatgcccgtgat
tttctcagtcgtttcagtgatttgtttcttgacttcggcggccatgcctgtgccggcggc
ttttccatggatatttctcagctggagattttcaaaaagcgggttatggacgagattgat
tccatggactgcctgcctgaagaagttgcagagatcaacatcgattgcaccctgcctgag
gcatatatgactcccgacatcatcaaggtagtcgagttctttgaaccctacggggagaag
aatactcctctggtctttttgatggaaggggcggttattgagaacatacaaatcatgaac
aataaaaacggttcggtgcagcatgtaaaaatgacgcttgctttcggagagtacaagtgg
ccggctttatattggaatgctgccgaccgtatcggcaaggattttgatgttgggaccagc
gtggatatagccttcaggctcggcaggaattactttcgtaatcaggaaacattgcagatt
acgattctggacctaaagccgtcaaattga

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