Sphaerochaeta globosa: SpiBuddy_1942
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Entry
SpiBuddy_1942 CDS
T01439
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu00061
Fatty acid biosynthesis
sbu00071
Fatty acid degradation
sbu01100
Metabolic pathways
sbu01212
Fatty acid metabolism
sbu02024
Quorum sensing
sbu04146
Peroxisome
Module
sbu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SpiBuddy_1942
00071 Fatty acid degradation
SpiBuddy_1942
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SpiBuddy_1942
09145 Cellular community - prokaryotes
02024 Quorum sensing
SpiBuddy_1942
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbu01004
]
SpiBuddy_1942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbu04147
]
SpiBuddy_1942
Enzymes [BR:
sbu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SpiBuddy_1942
Lipid biosynthesis proteins [BR:
sbu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SpiBuddy_1942
Exosome [BR:
sbu04147
]
Exosomal proteins
Exosomal proteins of breast milk
SpiBuddy_1942
Exosomal proteins of breast cancer cells
SpiBuddy_1942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADY13765
UniProt:
F0RWY4
LinkDB
All DBs
Position
2116639..2118348
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AA seq
569 aa
AA seq
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MKHSWDDLDQYRGVLFDGQWPTIIDLLLITEQQFGSRNSFTIFKPNRTTLTYTEVLNHVK
RVGSYLMEMGVNKNDRVIINGKNSPAWAIAYLAVLYAGAVVVPLDHQLHIDRVENLSSFV
NASFFFGDKNVLEALDSQKAWYKQLKGLASLQEDSKLFPHIDELKAAKLSERRARGEHDL
AAILFTSGTTGNEKGAMLTHANIVSDLYQACDGTFLSLNETDVLYALLPLHHSYCCTAVL
LESIKHGAECVFGQDIAVSRMINDLTQGKVTIFMGIPLLYNKLLAGLLKQVKKKGPFVNA
LILTMMTINGFTKKYLRWNLFRKAFNAMLLSKVGLDRNNFLICGAGPLSPKVFKQYQQLG
LDFIQGYGLTETSPILTLNPISHFKIESVGMVFPMVDMKIADPDQNGVGEIRVKGPNITQ
GYFNDAEHTAELFDEEGYLKTGDLGYLDKENYLYLKGRAKNLIVTEGGKNVYPEEIEDLF
QLYTQIDQILIRGYQENKDVPAEMIEAVVYPNAEYYKEHGVSSKDDLERVIKEVNQQLSG
YKKITRLTILDAPMDMTSTKKIKRNKVTA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattcttgggatgatttggaccaatatcgtggagtactgttcgatggacagtgg
cctaccatcatagatttgcttctcatcaccgaacagcagttcggcagcagaaatagtttc
accatctttaagcccaacaggaccacccttacctatacagaggtactcaatcatgtcaaa
cgtgttggctcctacctcatggaaatgggagtaaacaagaacgacagggtcatcatcaat
gggaaaaacagtccagcttgggcaatagcgtatcttgccgtcttgtatgcaggggctgtg
gtggttccgttggaccaccaactgcatatcgacagagtggaaaatctcagcagttttgtg
aacgcctcgttttttttcggtgataagaatgtccttgaagccctcgattcccaaaaagca
tggtataaacagctcaaggggttggcgtccttacaagaggatagtaagctgtttcctcat
attgatgagcttaaggctgccaagctttcagagcgcagagctagaggggaacacgatctc
gccgccattctctttacgagtgggactaccggcaatgagaaaggagccatgctcacgcat
gcaaacatagtcagcgacctgtatcaagcctgtgatggtacgttcctcagcctgaacgag
actgatgtcctgtatgccttgttgcccctgcaccactcctattgctgtactgcggtgcta
ctcgaatcgatcaagcatggggctgagtgtgtcttcggccaggacattgccgtcagccgt
atgatcaatgacctcacccagggcaaggtaactattttcatggggattcctctgttgtat
aacaagctgcttgctggactactcaaacaggtaaagaagaagggacccttcgtgaatgcc
cttattcttaccatgatgaccatcaacggttttacaaagaagtacctgcgttggaatctc
ttccggaaagctttcaatgcaatgctcttgagcaaagtcggtctggatcgcaacaacttc
ttgatttgtggtgcaggtcccctaagcccgaaggtattcaagcagtaccagcaactcggg
ctggatttcatccaaggatacggtctgactgagaccagcccgattctcacgctcaatccc
ataagccatttcaagattgaatcggtgggaatggtttttccgatggtcgatatgaaaatt
gccgaccctgaccagaacggtgtgggagaaattcgggtcaagggaccgaatatcacccaa
gggtacttcaacgatgcagaacacactgccgaactcttcgacgaagagggatacctgaaa
acaggagaccttgggtatttggacaaggagaactacctctaccttaaaggaagggctaag
aatctgattgtcaccgagggtggaaagaatgtctatcccgaggaaatcgaagacctcttt
cagttatacacccagattgaccagatacttattcgaggatatcaggagaacaaggatgta
cctgctgaaatgatcgaggcagtcgtctatcccaatgcagagtattacaaggaacatggg
gtttcatcgaaggatgacttggaaagggttatcaaggaagtgaaccaacagctctcaggc
tacaagaaaattacccgtctgacgattttggatgcgcctatggatatgactagtaccaaa
aagatcaaacgtaacaaggtgactgcttaa
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