Sphaerochaeta globosa: SpiBuddy_2110
Help
Entry
SpiBuddy_2110 CDS
T01439
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbu03032
]
SpiBuddy_2110
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_2110
Enzymes [BR:
sbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SpiBuddy_2110
DNA replication proteins [BR:
sbu03032
]
Prokaryotic type
DNA Topoisomerases
SpiBuddy_2110
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SpiBuddy_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Phage_TTP_12
Motif
Other DBs
NCBI-ProteinID:
ADY13931
UniProt:
F0RSY4
LinkDB
All DBs
Position
complement(2288101..2290644)
Genome browser
AA seq
847 aa
AA seq
DB search
MDNANTLIIVESPTKAKTITKFLPSSCKVVASKGHIRDLPEDRMAIDVEHEFACDYEVVS
GKESLIKELKSSLKKADRLLLATDEDREGESISWHLLEVLKPKIPFQRMVFHEITKSAIT
KALEGGRPLDENLVKAQEGRRIIDRLYGYTLSPTLWKKLSNKKLSAGRVQSVGLRLTVQR
ERERLAFQQSTYFDAKAELLAEQKQHFEAKLTAYQGHRLANSKDFDSISGQYKAKGQVLQ
LSREQAQAIVKELKAEPFRVQDIQRKPFVTRPNIPFTTSTLQQDAIKKLHISASDTMRIA
QKLYENGFITYMRTDSPSLSQEGTQAARSQVDQLYGQEYLSPSARYFAAKSAGAQEAHEA
IRPAGERFLIPSETHLIGKELALYELIWKRTLASQMAEAKKATTTVTLEAGEGTFTATGT
EIVFPGFLRAYVEGSDDPDAALEDKETLLPAMKVGQVCPLASLVEVEHQTKSPARYTEAY
LVQELEKRGIGRPSTYATIIKTLLDRRYAIKEGSALAPTFIGFAVCQFLETNFPQFVDYD
FTSMMEDGLDKIASGELDKIVFLSSFYCGESGLLSQNALQLKQDNKVVSKTLILPHISDK
NPVMIGPYGAYVIDANEAFISLPLSWIPGNITDEDVKTLIANGKEKQQPVTLGSGAVKGE
AVKVMNGRFGPYWQEGEGKDAKRASIPKWVQDANRSEELELANRYLSLPRNLGKDEDGNE
VLAYKGKYGPYIASNNKTRNLKKTDHDQELFSITLKEALALLSQEVEKSGAKGKKGGARS
AKASTVKDLGQFEGEAVSVATGRYGFYLKAGKENIALPDAYKKDEEKALSLTLDEAVEHI
RTKRAKE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggataatgccaatacattgatcattgttgagtcgcctaccaaggccaagacgataaca
aaattccttccttcctcatgcaaggtagttgcgagcaaaggacatatcagagaccttccc
gaggatcggatggctattgatgtggagcatgagttcgcttgtgactacgaggtggtgtcc
ggcaaggagtcattgatcaaggagttgaaaagcagcttgaagaaagccgatcgactgctg
ctggcaactgatgaggaccgtgaaggagagagtatttcctggcatttacttgaggttctt
aagcccaagattccgttccagcgtatggtttttcacgaaattaccaagagtgcaataacc
aaagccttggaaggtggcagaccgctggatgaaaatctggtcaaggcacaggagggaagg
cgcatcatcgaccgcctgtatgggtatacgctttcgccgactctctggaaaaagttatcc
aataaaaaactctcggcagggcgcgtgcaatcggtcgggttgcgtttgaccgtgcagcgt
gagcgagagcggcttgcgttccagcaaagcacctacttcgatgcaaaagcggagttgctt
gcagagcagaagcagcattttgaagccaagctgacagcctaccaaggtcatcgcctggca
aacagcaaggattttgattcaattagcggccaatacaaggccaaaggccaagtgctccag
ctttctcgggagcaagcccaggctatcgtaaaggaattgaaggcagagccgttcagggtc
caggatatccaacgcaaaccctttgtcacccggcctaacattcccttcaccaccagcacc
cttcagcaggatgctattaagaaactgcatatcagtgcctctgatacgatgcgcattgct
cagaaactctatgagaacggcttcattacctacatgagaaccgacagcccttctctgagt
caggagggaacgcaggccgccagaagtcaggtggaccagttgtacggccaagaataccta
tccccctcggcccgctactttgctgcaaaaagcgctggtgcacaggaagcccacgaggcg
atcaggcccgcaggggaacggttccttattccttctgagacacatttgatcggcaaggag
cttgccctgtatgaattgatctggaagcgtaccctggcaagccagatggcggaggccaaa
aaagccaccactaccgttacgcttgaggcaggagagggaacctttactgcaaccggaacg
gaaattgtgtttcccggctttctgagagcctatgtggaagggtcggatgaccccgatgcc
gctttggaagacaaggaaaccttattgcctgccatgaaggtaggccaagtctgcccgctt
gcaagccttgttgaagtcgagcaccaaaccaagagccctgcccgttatacggaagcctac
ttggtgcaggagctggagaaacggggaatcgggcgtccttcaacctatgctaccatcatt
aagacgcttttggaccgtcgctatgcaatcaaggaagggtctgccttggctccgaccttc
atcgggtttgccgtgtgccaatttctggagaccaattttccccagttcgtcgattatgac
tttacctcgatgatggaagatggcttggacaagattgcatcgggagaactcgataagata
gtgtttctcagttccttctattgtggtgaaagcggcctgttgagccagaatgccttacaa
cttaagcaggataacaaggtagtttccaagacgttgatactgccccatatcagcgataag
aacccggtcatgatagggccctacggtgcgtatgtcattgatgcaaatgaggcgttcatt
tccttgccgctttcctggataccgggcaatatcaccgatgaggatgtcaaaaccctgatc
gccaacggcaaggagaaacaacagccggtaacgttgggcagtggtgctgtcaagggtgag
gcggtgaaggtcatgaacggcaggttcgggccctattggcaggaaggcgagggaaaggat
gccaaacgcgcaagcatacccaaatgggtgcaggatgccaaccgatccgaggaattggag
ctggccaaccgctatctcagtcttcccagaaatctgggaaaggatgaggatggcaatgag
gtgcttgcctacaaaggcaagtacgggccctacattgcaagcaacaataagacacggaac
ctgaaaaagaccgatcatgaccaagagcttttctcgatcaccttgaaggaggctcttgca
ttgctttcccaagaagttgagaagagtggtgccaagggcaaaaagggcggtgcaaggtcg
gctaaggcttctacggtcaaggaccttggccagtttgaaggtgaagcggtttcggtggca
accggtcggtatggcttctacctgaaagcgggcaaggagaatatcgcactgcccgatgca
tacaagaaagatgaagagaaagcactttcgcttacgctcgatgaagctgtcgagcacatc
cgcaccaagcgtgcgaaggaatga
DBGET
integrated database retrieval system
