Sphaerochaeta globosa: SpiBuddy_2299
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Entry
SpiBuddy_2299 CDS
T01439
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SpiBuddy_2299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_2299
Enzymes [BR:
sbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SpiBuddy_2299
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SpiBuddy_2299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADY14118
UniProt:
F0RSK5
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All DBs
Position
2499424..2500266
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AA seq
280 aa
AA seq
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MHTIGPHTSIGGGLHLALARADEFGANALGMFTKNQRQWKAKPLTDEEITLFVETCASLH
FSNDQILVHDSYLINLANPDAQKRKQSLEAFIDELRRVEQLGLKLLNFHPGSHLAQIDAK
EGLLLVAQSLDIALSETESAIAVVENTAGQGSNLGSSFEELAYLYENCQSKNRIGFCIDT
CHAHAGGYDLSSVEKFEKTIDRFDHLIGLDKLMGMHLNDAKAPAASHLDRHESLGAGTIG
WATFEHIATDPRFENIPLVLETIDSEKWKDEVAHLRWGKR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgattggacctcatacaagcatcggtggagggcttcacctcgccttggccaga
gcggatgaatttggtgcaaatgccttaggcatgttcaccaagaatcagagacagtggaag
gccaagcccctgacagacgaggagataacgcttttcgtcgaaacatgcgcttcgctgcat
ttttccaatgatcagattctggtacatgacagctacctgataaatcttgcaaatcctgat
gcacaaaagcgtaagcagagcctagaggccttcatcgacgagctgaggagggttgagcaa
cttggcttgaagcttctcaacttccacccaggctcccacctcgctcagattgatgcaaaa
gagggcctgctcttggttgcacaaagcctcgacatagctcttagtgagaccgaaagtgcc
atcgcggtcgttgagaacaccgccggacaaggatccaatcttggctcgagttttgaagag
cttgcctacctgtatgagaactgccaaagcaagaatcgaatcggcttttgcatcgatacc
tgtcatgcgcacgccggcggctacgacttgtccagcgttgagaaattcgaaaagaccatc
gatcgttttgaccatcttatcgggttggacaagcttatgggcatgcatctcaacgatgcc
aaggcccctgcggcaagccatctcgaccgccatgaaagtcttggagcaggtaccatcggc
tgggccaccttcgaacatatcgccaccgacccacgattcgaaaacattcccttggttttg
gagaccatcgacagcgaaaaatggaaggatgaagtggcgcatctgcgctgggggaagcga
taa
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