Sphaerochaeta globosa: SpiBuddy_2614
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Entry
SpiBuddy_2614 CDS
T01439
Name
(GenBank) Type II site-specific deoxyribonuclease
KO
K03573
DNA mismatch repair protein MutH
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SpiBuddy_2614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_2614
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Strand discrimination factor
SpiBuddy_2614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutH
Motif
Other DBs
NCBI-ProteinID:
ADY14425
UniProt:
F0RTE3
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All DBs
Position
2838361..2839743
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AA seq
460 aa
AA seq
DB search
MPYLYDANSKESICDFARMLEDSCVAEALDTNAMYGGMPIGEASIEWDKEYSGKGGFGQY
LEEVYFGKRNNSLSKADFEEAGLELKTAPLKKLSNGEVRAKERIVLGLMDFMTIVHENFD
TSHFIAKNIDILLVFYFHDPLKEYCNLGIPLVDIWNCIQEDEYQIRKDWEYIVNKVQEGR
AHEISEGDTLYLGACTKGATKETAQRMQPYSPLLAHARAFCFKIQYVNHIYQILLDRKKD
RFVSYIHMLNSPGNELEQIVKNKFLPYIGMNVLMICTLLKIPFKLKSKNFYAMVTKRILG
AEDTQQIYEFEAADIQIKTIRIEPNGKCKESMSFKQIRYEEIIDQEWEDSDFYVELTSKF
FFIVFKHDHPEDPYILDRVLFWNMPETDLQVVKQVWLDAQQKISSGNYENFVKSSDRKIA
HVRPHATDSSDVMRTPQGTYEKKKSFWLNRNYIMEILNNN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgccttacctctatgatgcaaattcgaaggaatcaatttgtgattttgcccgtatgctt
gaagattcttgcgttgcagaagcacttgatacaaacgcaatgtatggggggatgcccata
ggagaggcctcgattgagtgggataaagaatattcaggtaaaggaggctttggtcagtat
cttgaggaggtctattttggcaaacgtaataattcattgtccaaagctgactttgaagaa
gctggattggaacttaagactgctccgctcaagaaactttcgaatggggaagtaagggca
aaagaaagaattgtgcttggactcatggattttatgactatcgtacatgagaattttgac
acatctcattttatcgcaaagaacatagacatcttattggttttctatttccatgatcct
ctcaaagagtactgcaatctcggcatcccgctagtagatatatggaactgtatccaggag
gatgagtaccagattaggaaggactgggaatatatagttaataaagtacaggagggccgt
gcccacgaaatctctgagggagatacactttaccttggagcatgtaccaaaggagcaaca
aaagaaactgcacaaagaatgcaaccatattctcctttgctcgcccacgctcgcgccttc
tgttttaagattcagtatgtcaatcatatctatcaaatactattggaccgaaaaaaggac
cgtttcgtctcatacatccacatgctcaactcccctggtaacgaactggagcaaatcgtt
aaaaataagttcttgccctacataggtatgaatgtacttatgatttgcactcttctaaaa
atcccttttaagctgaagtcaaaaaatttttatgcaatggtgactaaacgaatacttgga
gcagaggatactcaacagatatacgagttcgaggctgctgatatacagattaaaaccatc
agaattgaacctaatggcaaatgcaaagaatcaatgtcgttcaagcaaatccggtacgag
gagataattgatcaagaatgggaagatagtgatttttatgtagaacttaccagcaaattc
ttttttatagttttcaagcatgatcacccagaggatccctacattctcgaccgggttcta
ttctggaatatgcccgaaacagaccttcaagtagtaaagcaagtgtggttggatgctcaa
cagaaaatttccagtgggaattatgagaattttgtcaaatctagcgataggaaaatcgct
catgtgcggcctcatgcaacagactcttctgatgtaatgagaacaccacaaggaacctat
gagaaaaagaaaagcttttggcttaatcgaaattacatcatggaaattttgaacaataat
taa
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