Sphaerochaeta globosa: SpiBuddy_2799
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Entry
SpiBuddy_2799 CDS
T01439
Name
(GenBank) histone family protein DNA-binding protein
KO
K04764
integration host factor subunit alpha
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbu03032
]
SpiBuddy_2799
03036 Chromosome and associated proteins [BR:
sbu03036
]
SpiBuddy_2799
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_2799
DNA replication proteins [BR:
sbu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SpiBuddy_2799
Chromosome and associated proteins [BR:
sbu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SpiBuddy_2799
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SpiBuddy_2799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
EcoR124_C
Hexokinase_1
LPD14
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ADY14607
UniProt:
F0RS02
LinkDB
All DBs
Position
complement(3034876..3035202)
Genome browser
AA seq
108 aa
AA seq
DB search
MAGPKLTKAAIIESLHEKHGLNRADIHQIIDEFFEEVKDGLKNDQVIELRGFGTFEVRTR
KGREKARNPKTGAIVAVETHGVAIFRPGKELKDFVWELRDNKPVNEND
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaccaaaattgacaaaagcagccattattgagagtctccatgagaagcatgga
ctgaatagagccgatatccatcagattatcgacgagttcttcgaagaagtgaaagatggt
ctgaagaatgatcaagtcatcgagctccgtggatttggaaccttcgaggttcgtacccgc
aagggcagggagaaagctcgcaaccccaagactggtgctattgttgcagtcgagacacac
ggggtcgccatcttccgtcctggcaaagagcttaaggattttgtgtgggaattgcgtgac
aacaaaccagtgaacgagaacgactga
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