Sphaerochaeta globosa: SpiBuddy_3052
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Entry
SpiBuddy_3052 CDS
T01439
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_3052
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SpiBuddy_3052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
ChlI
DUF7125
DnaB_C
AAA_22
AAA_24
RecA_N
AAA
AAA_16
NTPase_1
GvpD_P-loop
Lon_C
zf-RING_10
AAA_5
DUF7129
TackOD1
AAA_14
nSTAND3
Rad51
GvpD_bR2
NACHT
SLFN-g3_helicase
MCM
nSTAND_NTPase5
zinc_ribbon_6
NB-ARC
Zn_ribbon_PaaD
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
ADY14857
UniProt:
F0RZV6
LinkDB
All DBs
Position
complement(3306793..3308145)
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AA seq
450 aa
AA seq
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MKDKAIQYVCSQCGRTETKWLGRCPDCGSWNTFEEEAVQSASVGKRAVISTATKPISLGE
VVVDPLFRYETGISELDRVLGGGVMRGSSILLGGEPGIGKSTLMIQVLEKCSVGRKVLYV
SGEESPSQVKLRAQRLGLTLSCIDIFCDTRVEILEKILSSAHYDVVVIDSLQTLSSEEIP
SPAGSVNQIRYCSTLLVGMCKQLGTSLFLIGHVTKEGTLAGPKVIEHLVDTVLYFEQVSS
GVRLVRAMKNRFGSVDEIGIFSMNEKGLTPVANPSSFFITDRSGSALPPGISYTPVIEGS
RTFLVEIQALTTSAKNGFSRIYSDRIDTARVTRVAAILERHASVRLSDQDIYVNVAGGMK
LNEVSIELPLALALWSAVSNKSLPKAMVSFGELSLAGEVRSVGFPDKREKASKELGFNRS
LLPRSSTRSLLIQHACTTMREALEICSSLQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagataaggctatccaatatgtctgtagccaatgtggcaggaccgaaaccaagtgg
ctcggccgctgtccggactgcggcagttggaacaccttcgaggaagaagccgtgcagagt
gcatcagttggaaaacgtgcagtcatcagtacggcaaccaagccgatctcgctcggcgag
gtggtagtcgatcctctctttcgctatgaaaccggtatctctgaactcgaccgggtcttg
ggtggaggcgtcatgcgtggctcttccatcctgctcgggggagaacccggcatcggcaaa
tcaacgctgatgatccaggtgcttgagaaatgttcggtcggcaggaaagtcctgtatgta
tcgggggaggagtctcccagccaagtgaagctgcgtgcccaacgcctggggctgacactc
tcttgtatcgatatattctgtgatacccgtgttgagatcttggagaaaattctctcttct
gctcactatgatgtggtggtaattgactcattgcagaccctttccagtgaggagattccc
tctccagccgggtcggtgaaccagatccgctattgctcaacccttttggttggaatgtgc
aagcaactgggaacctccctctttcttatcggtcatgtcaccaaggaaggcacccttgcc
ggtccgaaagtcatcgaacacctcgtcgataccgttctctattttgagcaggtttccagt
ggggtgcgtctggtacgggctatgaagaaccgcttcggttccgttgatgaaatcggcatc
ttcagcatgaatgagaagggtctgactccggtggcgaatccttcttcctttttcatcacg
gatcgttcaggctcagcgttgcccccgggcatttcctatactccggtcatagaggggtcg
agaacatttctcgtggaaatccaggcattgaccacctctgccaagaacggattcagtcgc
atctattcggatcgtatcgatactgcacgggtcacccgggttgccgccatactggaacga
catgcctcggtgcgcctcagcgatcaggatatctatgtgaacgtagcagggggaatgaag
ctcaacgaagtctccatcgaacttcccttggcccttgctttatggtcggctgtcagcaac
aagagccttcccaaagctatggtgagttttggggaattgagtttggccggggaagtacgc
agcgtcggttttcccgacaagcgagagaaggcctccaaggagctgggcttcaatcgttca
ctgctaccccgcagcagtacgcgctcgcttttgatccagcatgcatgtactacaatgcga
gaggcgttggagatctgcagctcactgcaataa
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