Salmonella bongori serovar 48 z41 --: N643_03480
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Entry
N643_03480 CDS
T03249
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sbv
Salmonella bongori serovar 48:z41:--
Pathway
sbv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N643_03480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbv03400
]
N643_03480
DNA repair and recombination proteins [BR:
sbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N643_03480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N643_03480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
IF2_N
AAA_22
PRDA1_C
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
AID24400
LinkDB
All DBs
Position
753685..755706
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPR
YTIYPKTHYVTPRERILQAMEEIKDELANRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVIDVLALG
QNIAKTKAKGKGKGRVTAKSGIVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggaggct
atacgccgcctggaagagggcctggaggatggcctggcgcatcagacgttgttgggcgta
accggctccgggaagacattcaccattgccaacgtcattgccgacttgcagcgaccgacg
atggtactggcgcctaataaaacgctggcggcgcagctttatggcgaaatgaaagcgttt
ttcccggaaaatgcggtggagtattttgtctcttactacgattactatcagccggaagcg
tatgtgccgagttcggatacgtttatcgaaaaagacgcgtcggtgaacgaacatattgag
caaatgcggctgtcggccacgaaagcactgcttgagcgacgcgatgtcgtggtggtggct
tctgtgtccgctatctacgggctgggtgatcctgatctctatctgaaaatgatgctacat
ctgacggtaggaatgctgatcgaccagcgcgcgattctgcgccggctggccgaactgcaa
tatacccgaaacgaccaggcgttccagcgcgggacgttccgcgtgcgcggcgaagtgatc
gatatcttcccggcggaatctgatgatattgcgctgcgcgttgagttgtttgatgaagag
gttgagcgcctgtcgctatttgacccgttaaccgggcaggtcgagtcaacagtgccacgt
tataccatctatcctaaaacgcactatgtgacgccacgcgagcgtattctccaggcgatg
gaagagataaaagatgagctggcgaacaggcgtaaggtgctgctggcgaataataaactg
cttgaagaacagcggttaagccagcgcacgcagttcgatttagagatgatgaatgagctg
ggctactgctcgggtattgaaaactattctcgctttctgtctggccgcgggccgggcgag
ccgccgccaaccttgttcgattatctgcccgccgacggactgctggtggtggatgagtcc
cacgtgacgatcccgcagatcggcggcatgtatcgcggggaccgggcgcgtaaagagacg
ctggttgagtatggtttccgtctgccttcggcgctggataaccgtccgctaaagtttgaa
gaatttgaagcgttagcgccgcaaaccatatatgtttccgctacgcccggcaactatgaa
ctggagaaatccggtggtgatgtcgtggaccaggtggtacggccaaccgggctgctggac
ccgattattgaagtgcgtccggtggcgacccaggtggacgatttactttctgaaatccgt
cagcgtgcggccattaacgagcgtgtgctggtgaccacgcttaccaagcggatggcggaa
gacctgactgaatatctggaagagcacggcgagcgtgtgcgttatctgcattcggatatt
gataccgtggaacgcatggaaatcatccgcgatttgcgtctgggggagtttgacgtgctg
gtgggaattaacctgttacgcgaagggctggatatgccggaagtctcgttggtggcgatt
ctggacgctgataaagagggctttctgcgatctgagcgttccttgattcagaccattggc
cgcgcggcgcgtaacgtcaatggtaaagcgattctttacggcgataagatcacgccgtcg
atggcgaaagcgattggcgaaactgaacgtcgtcgcgagaagcagcagaagtacaacgaa
gaacacggcatcactccgcaggggctgaacaaaaaagtgatcgatgtactggcgctgggg
cagaacattgcgaaaaccaaagcgaaggggaaaggaaaaggccgcgttacggcgaaatcc
gggattgttgaactggatatgacgccaaaagcattgcagcagaaaattcatgagctggag
gggcaaatgatgcagcacgcgcagaatctggagtttgaagaggccgcgcaaattcgcgac
cagctgcatcaactacgcgagctgtttatcgccgcctcctga
DBGET
integrated database retrieval system
