Salmonella bongori serovar 48 z41 --: N643_04340
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Entry
N643_04340 CDS
T03249
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbv02000
]
N643_04340
Transporters [BR:
sbv02000
]
Other transporters
Pores ion channels [TC:
1
]
N643_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AID24535
LinkDB
All DBs
Position
complement(957154..958260)
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AA seq
368 aa
AA seq
DB search
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHD
TGFIPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLT
AKLGYPITDDLDVYTRLGGMVWRADTKSNAPGYSTKDHDTGVSPVFAGGIEYAITPEIAT
RLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQEEAAPVVAPAPAPAPEVQTKHFTLK
SDVLFTFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRA
QSVVDYLISKGIPANKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVKGIK
DVVTQPQA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgttatctcgttggagatattcatggcgtattttggatgataacgaggcgcaaaaaatg
aaaaagacagctatcgcgattgcagtggcactggctggtttcgctaccgtagcgcaggcc
gctccgaaagataacacctggtacgctggtgctaagctgggctggtcccagtaccatgac
actggcttcattcctaacaatggcccaacccatgaaaaccaactgggcgcaggcgctttt
ggtggttatcaggttaacccgtacgttggctttgaaatgggctacgactggttaggccgt
atgccgtacaaaggcgacaacatcaatggcgcttacaaagctcagggtgttcagctgacc
gctaaactgggttatccaatcactgacgatctggacgtttatactcgtctgggtggtatg
gtatggcgtgcagataccaagtctaacgcaccgggttattctaccaaagaccacgacacc
ggcgtttccccggtattcgcgggcggtatcgagtatgctatcacccctgaaatcgcaact
cgtctggaataccagtggactaacaacatcggtgatgctaacaccatcggcactcgcccg
gacaacggcttgctgagcgtaggtgtttcctaccgttttggtcaggaagaagccgctccg
gtagtagctccagccccggcgccggcgccggaagtacagaccaagcacttcactctgaag
tctgacgtcctgtttaccttcaacaaagctaccctgaaaccggaaggtcagcaggcactg
gaccagctgtacagccagctgagcaacctggatccgaaagacggttccgtagtggttctg
ggcttcactgaccgcatcggttctgacgcttataaccagggcctgtcagaaaaacgtgct
cagtctgttgtggattacctgatctccaaaggtatcccggctaataaaatctccgcacgc
ggcatgggcgaatctaacccggttaccggcaacacctgtgacaacgtgaaagctcgcgct
gccctgatcgactgcctggcaccggatcgtcgcgtagagatcgaagttaaaggtatcaaa
gacgtagtaactcagccgcaggcttaa
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integrated database retrieval system
