Salmonella bongori serovar 48 z41 --: N643_05010
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Entry
N643_05010 CDS
T03249
Name
(GenBank) peptigoglycan-binding protein LysM
KO
K19236
L,D-transpeptidase YcfS
Organism
sbv
Salmonella bongori serovar 48:z41:--
Pathway
sbv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
N643_05010
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbv01002
]
N643_05010
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbv01011
]
N643_05010
Peptidases and inhibitors [BR:
sbv01002
]
Cysteine peptidases
Family C82
N643_05010
Peptidoglycan biosynthesis and degradation proteins [BR:
sbv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
N643_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AID24639
LinkDB
All DBs
Position
complement(1082927..1083892)
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AA seq
321 aa
AA seq
DB search
MLKNTRLSRWLAFIALAATITLALPTQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDVPREGIVINLAELRLYYYQPEK
NTVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIILNGPMQTFKDAPQTDAVVMDHVM
EARSGMPVDVTRHPETKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaatacgcgactctctcgctggctggcgtttatcgcgcttgctgcgaccata
acgcttgccctccccacgcaggcgaatacctggcctcttccacctcccggcagtcgactg
gtgggggaaaataaatttcatgtcgttgaagacgacggcggttcgctggaagctatcgcc
aaaaaatataacgtgggttttttagctttgttacaggccaaccctggcattgacccatat
gtgccacgtgcaggcagcgtactgacgattccactgcaaacactgctgccggatgtgccg
cgcgagggcattgtcattaatcttgcggaattacgcctttattattatcaacccgagaaa
aataccgttacagtctaccctatcggaattggtcaactgggcggcgatacgttaacgcca
acgatggtaacaaccgtatcagataaacgcgccaacccgacatggacgcctactgcgaat
attcgcgcacgctataaagcgcaaggcatcgatcttcccgctgtcgtgcctgccgggccc
gataacccgatggggcatcatgcaattcgtttagcggcttacggcggtgtttatctgctg
catggcactaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgcctg
cgtgatggcgatatagagaccttgttccgccaggttacgccgggaaccaaagtgaatatc
attaatacgccgattaaagcttcggtagaacctggcggcgtacggctggtagaggttcat
cagccgctgtctaaaaatattggcgacgatcctcaggtactgccgattatcctgaatggt
cccatgcagacgtttaaagacgcgccgcagaccgacgctgtagtcatggatcatgttatg
gaagcacgttccggaatgcctgtagacgtgacccgtcatccggagacaaaaccgcagtcg
ctgtaa
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