KEGG   Salmonella bongori serovar 48 z41 --: N643_05945
Entry
N643_05945        CDS       T03249                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
sbv  Salmonella bongori serovar 48:z41:--
Pathway
sbv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sbv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    N643_05945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sbv02044]
    N643_05945
Secretion system [BR:sbv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N643_05945
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 Cu_amine_oxidN1 Gp44-like_2nd DUF3540
Other DBs
NCBI-ProteinID: AID27139
LinkDB
Position
1280861..1282825
AA seq 654 aa
MPDTTIIKLTAPALTGLTAATAYTESQLNGLTSATVAGTTSVPLTLDTALASHLTATISN
ADYDGLIAEAHQLPATGNADRYQFVLRSWLWWLTLSSNNRVFQNLSAQEIVEKVFKDGGF
SDYKFQLKSKPAKREYCLQYNESDFNFISRLLEQEGICWFFTHAEGKHTLVLADDNSAFP
PIPGEKKVKYQAAQSGARETGMIRSAQLHLQATAQGFQGSDYNYEQPKAALFSQAGEKKG
GMQYQHPGRFSVKAEGDALAAWKVNALKAQAKQLVGESDCAALMAGHWFTLTDHDDKSLN
IDWLVTAVSHEYDGEHYRNRFTAIPKATPYRPLAVTPQPFMHTQTATVVGKSGEEIWTDK
LGRVKVQFPWDREGKSDETSSCWLRGATAWSGNGFGAQFIPRIGQEVVVSFIDGSPDKPL
ITGCVYNGANALPYALPANQTQSGIKTKSEKGFNELRFDDKKDAELLAMQAQKDFQLTVL
NDSKTTVSHDEIQSVKNDRTRTVEEGNETVTLKKGNRTVKIEKGSDTLEVKDKRSVTVKG
DQEHAVDGNETHKVKGNYTLNVDGNLTIKVCGTLTLESSKTLNLKSGADLSASATSGLKL
DATNIASEAKASLTQKAATISHEAKATLTSKASATQTVDGGGMLIIKGGLVRIN
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgcccgacaccaccattatcaaactcaccgccccggcgttaaccggccttaccgccgcg
accgcgtacaccgaatcgcaacttaacggcctgacctccgcgaccgtcgcgggaaccacc
tccgtgccgttaactctcgacactgcgctggcgtcccatctgaccgccaccatcagcaac
gctgattacgacgggttgatcgctgaggcgcaccagcttccggcgaccggcaacgccgat
cgctatcagtttgtgctgcgctcgtggctgtggtggctgacgctctccagcaacaaccgt
gtgtttcagaacctcagcgcgcaggaaatcgtcgagaaagtatttaaagacggcggattt
agcgactacaaattccagctgaaaagcaaaccggcgaagcgtgaatactgcctgcaatat
aacgaaagcgacttcaactttatttcgcggctactggagcaggaggggatttgctggttc
ttcacccatgcagaaggcaagcacaccctggtgctggcggatgataatagcgctttcccg
cccattcccggcgagaaaaaggtgaaatatcaggcggcgcagagcggcgcgcgggaaacc
ggcatgattcgttcggcacagctgcatctgcaggcgaccgcccagggctttcagggcagc
gactataactacgagcagccaaaagccgcgctgttttcgcaggcaggtgagaagaaaggg
ggcatgcagtatcagcatccgggccgctttagcgtcaaagccgaaggcgacgcgctggcg
gcgtggaaggttaacgccctgaaggcgcaggcgaaacaattggtgggtgaaagcgactgc
gcggcgctaatggctggacactggtttaccctcaccgatcatgatgacaaatccctcaac
atcgactggctggtcaccgccgttagccatgaatacgacggcgaacactaccgcaaccgc
tttaccgccatcccgaaggccacaccgtatcgcccgctcgccgtgacgccacagcccttt
atgcatacgcaaacggcgacggtggtgggtaaaagcggcgaggagatctggaccgacaaa
ctcgggcgggtgaaggtgcagttcccgtgggacagagagggcaaaagcgacgaaaccagc
tcctgctggctgcggggggccaccgcctggagcggcaacggcttcggcgcgcagtttatc
ccgcgcattggtcaggaagtggtggtgagctttatcgacggcagcccggataaaccgctg
attaccggctgcgtctacaacggtgcgaatgcgctgccctatgcacttccggcgaaccag
acccagtcaggcattaaaaccaaaagtgaaaaaggcttcaacgaactacgcttcgacgat
aaaaaagatgccgagctgctggcgatgcaggcacaaaaagattttcagctcaccgtgctg
aacgacagtaaaaccacggtcagccatgacgagatccagagcgtcaaaaacgaccgtacc
cgcaccgttgaagagggcaatgaaaccgtcaccctgaaaaagggcaaccggacggtgaaa
attgaaaaaggtagcgacacgctggaggtgaaagacaagcgtagcgtaacggtgaaaggc
gatcaggaacacgcggtggacggcaacgagacgcacaaggtgaagggcaactataccctc
aacgttgacggcaacctgacgatcaaggtctgcggcacgttgacgctggaaagcagtaaa
actctgaacctgaaaagcggggctgatctcagcgccagcgcgacgtcaggtctgaagctg
gacgccaccaatatcgccagcgaagcgaaagcgtcgctcacccagaaagcggccaccatc
agtcatgaagcgaaggccacgctcaccagcaaggccagcgccacccagacggtggacggc
ggcgggatgctgattatcaaaggcggactggtgaggattaactga

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