Salmonella bongori serovar 48 z41 --: N643_07525
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Entry
N643_07525 CDS
T03249
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbv03016
]
N643_07525
Enzymes [BR:
sbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N643_07525
Transfer RNA biogenesis [BR:
sbv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N643_07525
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AID24988
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All DBs
Position
1619886..1621820
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEALIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFREGDWAVAEMRRHPLKGDRSFYADLTQFITFADDHFVPWWVTLARHNLEKEAPNGVAT
EILDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANESRPALACRMIIAADGSIDDDITF
FAATIESKAKLAYDNVSDWLENSGTWQPDNEGIAQQIRLLYRICLSRGEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANAEALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETIARPQEDITVQMTERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgtaaaagccacggaaaaaggctttggcttcctggaggttgatgcg
caaaaaagctatttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtgatccacacggaaaaagaacgtgagtcagccgaaccggaagcactgatcgaa
ccgtttctgacccgttttgtgggaaaagttcagggtaaaaatgatcgtctgtccattgtg
ccggaccatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gaattcagagaaggtgactgggcagttgccgaaatgcgtcgtcatccgcttaaaggcgac
cgctcattctacgccgatttaacgcagttcatcacctttgccgacgatcactttgtgccc
tggtgggttacgcttgcacggcataatctggaaaaagaagcgccaaacggcgtagcgact
gagatacttgacgaagggctggagcgtcaggatttaactgcgctaaatttcgtgactatc
gatagcgccagcaccgaagatatggatgatgcgctttatgccgaggagttagcggatggc
aggctccagcttacagtagctatcgccgatcctaccgcatggattgccgagggcagtaaa
ctggataatgctgcgaaaattcgcgctttcaccaactacttgccgggctttaacattcct
atgctgccgcgcgagttatctgacgatttgtgctcactgcgcgccaatgaatcgcgtccg
gcgctcgcctgccgcatgatcatcgccgcggacggctccatcgacgatgacatcaccttt
tttgcagcgacgatcgaatcgaaagccaaactggcatatgacaatgtctctgactggctg
gaaaatagtggaacctggcagccggataatgaaggcattgcccagcaaatccgtctgttg
taccggatttgcctgagccgcggtgagtggcgccatcatcatgcgctggtattcaaagac
cgtccggattaccgctttgtgttgggtgaaaaaggcgaagtcctggatattgtggcggaa
ccgcgacgtatcgccaaccgtatcgtagaagagtcaatgatcgcggccaacctttgtgct
gcgcgcgtgctgcgcgataagctcggtttcggtatttataacgtgcatactggctttgat
cctgccaatgccgaggctctggcagcactgttgaagacccacggtttacatgtcgatgcc
gaagaagtactgacgctggaaggtttctgtaagctgcgtcgcgaactggatgcacaacct
tccggtttcctggatagccgtattcgccgcttccagtcttttgcggaaatcagtaccgag
ccagggccgcatttcggcctcggcctcgaagcttacgctacctggacttctcctatccgt
aagtatggcgatatgattaaccatcgtctgctgaaagcagtcatcaagggtgagactatt
gctcgtccgcaggaagatattaccgtacagatgacggaacgccgtcgcctgaaccgtatg
gcggagcgtgatgtcggcgactggttatatgcgcgtttccttaacgataaagcaggtacg
gacacgcgttttgcagcagaaattattgatgtcagccgtggcggtatgcgcgtacgactg
gtcgataatggtgctatcgcttttatccctgccccattcttacatgccgttcgcgatgag
ctggtatgtagccaggaaaacggtacggtacagattaaaggcgaaacggtttataaagtg
acagatgttattgatgtcaccattgcggaagtccgcatggaaacacgcagtattattgcc
cgaccagtagcgtaa
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