Salmonella bongori serovar 48 z41 --: N643_07600
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Entry
N643_07600 CDS
T03249
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbv03032
]
N643_07600
03400 DNA repair and recombination proteins [BR:
sbv03400
]
N643_07600
Enzymes [BR:
sbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N643_07600
DNA replication proteins [BR:
sbv03032
]
Prokaryotic type
DNA Topoisomerases
N643_07600
DNA repair and recombination proteins [BR:
sbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N643_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AID24997
LinkDB
All DBs
Position
complement(1635177..1637774)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFDKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGDALPLQVTH
QNDKPFRPVSREQTLAAISLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVSVMAESLKDMEADAQKLYQLIWRQFVACQMTSAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKSDEDRTLPAVNKGDALTLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGKNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgacccgtggcacaactgggat
gcgcactatgaagtgctccccggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccatatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcatctgcgggaagtgattggcggcgatgacgcgcgctacagccgcgtagtctttaat
gaaattactaaaaatgcgattcgccaggcgtttgacaagcccggcgagttaaatattgat
cgcgtcaatgcgcagcaggctcgtcggtttatggatcgcgtggtgggctatatggtctcg
ccgttgctgtggaaaaagatcgcccgtggcctgtcggcaggtcgcgtacagtctgtcgcg
gtccgtctggtcgtcgagcgcgaacgtgaaattaaagcgtttgttccggaagagttctgg
gaaatcgacgccaatacgactacgccttctggcgatgcgttacctctgcaagtgacacat
cagaacgacaagccgttccgaccagtgagccgcgagcagacgcttgccgccattagtctg
ctggaaaaagcgcgctatagcgtactggagcgtgaagataaaccgaccagcagcaagccg
ggggcaccgtttatcacctccacgctacaacaggcggccagcacccggttgggttttggc
gtgaagaaaaccatgatgatggcgcagcgcttgtatgaagcgggttacatcacctacatg
cgtactgactccacaaatctgagtcaggatgcggttaacatggtgcgtggctacatcagc
gataatttcggcaagaaatacctgcctgataatccgaatcagtacgccagtaaagagaat
tcacaggaggcgcacgaagcgatccgtccttctgatgtgtctgttatggcggaatcgctg
aaagacatggaggctgatgcgcagaagctgtatcagctgatttggcggcagtttgttgcc
tgccagatgacatctgcccaatacgactctacgacgcttaccgttggggcgggcgagttc
cgtctgaaagcgcgtggccgtattctgcgttttgacggctggacaaaagtgatgccagcg
ctgcgtaagagcgatgaagatcgcaccttgccggctgtgaataaaggcgatgcgctgacg
ctacttgaactgacgcccgcgcagcactttaccaaaccgccagcccgttttagcgaagcg
tcgttggttaaagaacttgaaaagcgtggtattggccgcccgtctacctatgcgtcgatc
atttctaccattcaggatcgcggctatgttcgcgttgagaatcgtcgcttctatgcggaa
aaaatgggtgaaatcgttaccgatcggctggaagaaaatttccgcgaattgatgaactac
gattttaccgcgcagatggaagatagcctggatcaggttgcgaatcatcaggccgagtgg
aaagcggtactggataacttcttcagcgattttactcagcagcttgataaagccgagaaa
gatccggaagaaggggggatgcgccctaaccagatggtgttgaccagtatcgactgccct
acctgtggccgtaaaatggggattcgtaccgccagtacgggggtttttctcggttgttca
ggttatgcgctttcgccaaaagagcgttgtaaaaccacgattaacctggtgccggaaaat
gaagtcctgaacgtactggagggcgacgacgccgaaaccaacgcgctacgtgcgaagcgt
cgttgtcagaagtgtggtacggcgatggatagctatctgattgatccaaagcgtaagttg
catgtctgcggtaaaaacccaacctgtgacggctacgagattgaagaaggcgagttccgc
atcaaagggtatgatggcccgatcgttgagtgtgagaaatgtggttccgaaatgcatctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgagtgtaagaatacccgt
aagatcctgcgtaacggcgaagttgcgccgccgaaagaagatcccgttccactgccggaa
ctgccgtgtgaaaaatcggacgcatactttgtgttgcgcgacggcgccgccggaatattc
ctggcagccaacacctttccgaaatctcgcgaaacgcgtgcgccgttagttgaggagctc
taccggttccgcgatcgcctaccggagaaattacgttacctggcggatgcaccgcaacag
gatccggaagggaataaaacggttgttcgcttcagccgtaaaactaagcaacagtatgtc
gcggcggaaaaagaggggaaagcgacgggatggtcagcgttcttcgttgacggtaagtgg
gttgaaggcaaaaaataa
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