Salmonella bongori serovar 48 z41 --: N643_11335
Help
Entry
N643_11335 CDS
T03249
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Pathway
sbv00260
Glycine, serine and threonine metabolism
sbv00460
Cyanoamino acid metabolism
sbv00630
Glyoxylate and dicarboxylate metabolism
sbv00670
One carbon pool by folate
sbv00680
Methane metabolism
sbv01100
Metabolic pathways
sbv01110
Biosynthesis of secondary metabolites
sbv01120
Microbial metabolism in diverse environments
sbv01200
Carbon metabolism
sbv01230
Biosynthesis of amino acids
sbv01240
Biosynthesis of cofactors
sbv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N643_11335 (glyA)
09102 Energy metabolism
00680 Methane metabolism
N643_11335 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N643_11335 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N643_11335 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N643_11335 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N643_11335 (glyA)
Enzymes [BR:
sbv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N643_11335 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AID25565
LinkDB
All DBs
Position
complement(2421853..2423112)
Genome browser
AA seq
419 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYEEMAKLAKEHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFQDKEAEVKELAGWMCDVLDNINDEATIERVKAKVLDICARFPVYA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaattgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacattgaactgatcgcctccgaaaactacaccagc
ccgcgcgtgatgcaggcgcaggggtctcagctgaccaacaaatacgctgaagggtatccg
ggtaagcgctactacggtggttgcgaatatgtggatatcgttgagcaactggctatcgat
cgcgcaaaagaactgttcggcgccgactatgctaacgtccagccgcattctggctctcag
gctaactttgcggtctataccgcgctactgcaaccgggcgataccgttctgggtatgaac
ctggcgcagggcggccacctgactcacggctccccggttaacttctccggtaaactgtac
aatatcgttccttatggtattgatgagtccggtaaaattgattacgaagagatggcgaaa
ctggccaaagagcacaagccgaagatgattatcggtggcttctctgcctactccggcgtg
gttgactgggcaaaaatgcgtgaaatcgctgacagtatcggcgcatacctgtttgtcgac
atggcgcacgtggcgggcctgattgccgcaggcgtttacccgaacccggttccccatgcg
catgtggtcactaccaccacccataaaaccctggcgggtccgcgcggcggcctgattctg
gcgaagggcggcgacgaagatctgtacaaaaaactgaactccgccgtcttcccaagcgcg
cagggcggcccgctgatgcacgtgatcgccggtaaagcggtggcgctgaaagaagcgatg
gagccggaattcaaagtttaccagcagcaggttgccaaaaacgccaaagccatggtggaa
gtgttcctgaaccgcggctacaaagtggtgtctggcggcactgaaaaccacctgttcctg
ctggacctggtggataaaaacctgaccggtaaagaagctgacgccgccctgggccgtgcc
aatatcaccgtgaacaaaaacagcgtgcccaacgatccgaagagcccgttcgtaacctcc
ggtatccgtatcggttcaccggcggtcactcgtcgtggcttccaagacaaagaggcggaa
gtgaaagagctggctggctggatgtgcgacgtgctggacaacatcaatgatgaagccacc
attgaacgcgtgaaagcgaaagtgctggatatctgcgcacgcttcccggtttacgcgtaa
DBGET
integrated database retrieval system