Salmonella bongori serovar 48 z41 --: N643_11485
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Entry
N643_11485 CDS
T03249
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbv03009
]
N643_11485
Enzymes [BR:
sbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N643_11485
Ribosome biogenesis [BR:
sbv03009
]
Prokaryotic type
rRNA helicases
N643_11485
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
Shikimate_DH
AAA_22
CMS1
Mov-10_helical
Motif
Other DBs
NCBI-ProteinID:
AID25593
LinkDB
All DBs
Position
2459492..2460826
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSIRERKKIHQWYYRADNYEHKFELLK
HLLKQDDATRTIVFVRKRERVHELAEQLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPTTRAPSEKMTGKPSKKVLAKRAEKKKEKEKEKPRVKKRH
RDTKNIGKRRKPSGTQTPEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggattcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgcgatgtactcggttctgcgccgacaggcactggtaaaacggcggcatatctgctg
ccggcgttgcagcacttgctcgacttcccgcgtaaaaaatccgggccgccgcgtattctg
atcctgacgccaacccgcgagctggcaatgcaggtggccgatcacgcccgcgagctggcg
aagcatacccatctggatatcgccaccattactggcggcgtcgcgtacatgaaccatgcc
gaagtattcagcgaaaaccaggatatcgtagtcgccaccacgggccgtctgctgcaatat
attaaagaagagaactttgactgccgcgcggttgaaacactgatcctcgacgaggccgac
cggatgctggacatgggctttgctcaggacattgaacatatcgccggggaaacccgttgg
cgtaagcagaccatgctgttctccgcgacactggaaggcgatgcgatcaaagattttgct
gagcgtctgctggaagatccggtcgaagtttccgccaccccatccattcgtgagcgtaaa
aagattcatcagtggtattaccgtgcggataactacgagcataagttcgaactgcttaag
cacttactgaagcaggatgatgccacccgtaccatcgtgtttgtgcgtaagcgcgagcgt
gtccatgaactggctgagcaactacgtctggcggggatcaacaactgctatctcgaaggc
gagatggcgcagatcaaacgcaacgaaggcattaagcgtctcaccgatggccgcgttaac
gtgctggttgcgaccgacgttgccgcgcgcgggatcgatattcctgacgtaagccacgtt
attaacttcgacatgccacgcagtggcgatacctacctgcatcgcattggtcgtacaggc
cgtgcggggcgcaaaggcaccgctatttccctggtcgaagcccacgaccatctcctgctg
ctgaagattggccgctacatcgaagagccgctgaaagcgcgtgtgattgacgagctacgc
ccgactacgcgcgcacccagtgaaaagatgaccggtaaaccatcgaagaaagtgctggcg
aaacgcgccgagaagaaaaaagagaaagaaaaagagaaaccgcgcgtgaagaaacgtcac
cgcgatactaaaaacatcggtaagcgccgcaagccaagcggtacgcagacgccggagcaa
tccagcgaagagtga
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