Salmonella bongori serovar 48 z41 --: N643_12125
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Entry
N643_12125 CDS
T03249
Name
(GenBank) transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbv03000
]
N643_12125
Transcription factors [BR:
sbv03000
]
Prokaryotic type
Helix-turn-helix
Other families
N643_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_3
GAF_2
AAA_5
AAA
HTH_8
AAA_16
AAA_2
AAA_19
HTH_50
PilB3_N
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AID25688
LinkDB
All DBs
Position
2593707..2595785
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AA seq
692 aa
AA seq
DB search
MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGIVLWQAQSQRAQ
YYATRDNGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQLATSGLYPEFGHY
CLLPLAAEGRIFGGCEFIRQEDRSWSDKEYDRLHTFTQIVGVVAEQIQNRVNHNVDYELL
CRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYST
HYLDEHNPAHEQSEVDETGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTL
CLLPLMSGNTMLGVLKLAQCDEKVFTTANLKLLRQIAERVAIAVDNALAYQEIHRLKERL
VDENLALTEQLNNVDSEFGEIIGRSDAMYNVLKQVEMVAQSDSTVLILGETGTGKELIAR
AIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYY
RLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRE
LENVIERAVLLTRGNVLQLSLPDISALAPDTAPVATEIAKEGEDEYQLIIRVLKETNGVV
AGPKGAAQRLGLKRTTLLSRMKRLGIDKDALV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacacccatgagcgatcttggacagcaaggtttgttcgatatcactcgtacc
ctattgcagcagcccgatttggcgtcgctcagtgaagcactttcgcaactggtaaagcgt
tcagcgctcgccgacagcgccggcattgtgctatggcaggcgcagtcgcaacgcgcacaa
tattatgcgacgcgagataatggccgtcctgttgaatatgaagatgaaaccgtactggca
cacggcccggtacgtcgcatcctttcccgccccgatgcgttgcactgtaatttccatgag
tttaccgaaacctggccgcagctcgccacaagtggcctctacccggagtttggtcactac
tgcctgcttcctttagctgctgaaggccgtattttcggcggctgcgagtttatccgtcag
gaagatcgttcctggagcgacaaggaatatgaccgcctgcacacatttacccaaattgtc
ggcgtggtcgccgagcaaatccagaaccgggtaaaccataatgtcgattacgagctctta
tgccgcgagcgcgataatttccgtattctggtggcgatcaccaatgccgtcttgtcgcgt
ctggatattgatgagctggtcagtgaggtcgctaaagagatccaccattatttcaacatc
gacgcgatcagcattgtattgcgcagtcatcgcaaaaataagctgaatatctactctacc
cactaccttgatgagcataatccggcgcatgagcagagcgaagttgacgaaaccggcacg
ctcacggaacgcgtttttaaaagtaaagagatgctgcttatcaatctcaacgaacgcgat
ccgcttgccccctacgagcgaatgctgttcgatacctggggcaatcaaatccagacgcta
tgcctgctgccgctgatgtccggtaatacgatgctgggcgtactcaaactggcgcagtgc
gatgaaaaagtatttaccaccgccaacctcaagctactccgtcagattgccgaacgggtg
gcgattgcggtggataatgcgctggcctatcaggaaatccaccgtctgaaagaacggctg
gttgatgaaaatctggcgcttacggaacagcttaataacgtcgacagcgaatttggcgag
atcatcgggcgcagcgacgcgatgtacaacgtgctcaagcaggttgaaatggtagcgcag
agtgatagtaccgtactgattctgggcgaaacgggaaccggtaaagaactgattgcccgc
gctattcacaacctgagcggacgtagcggacgcagaatggtaaagatgaactgcgccgcg
atgcctgcgggtctgctggaaagcgatctgtttggtcatgagcgaggcgcgtttaccggc
gccagtgcgcaacggattggccgttttgagttggcggataaaagctcgctatttctggat
gaagtgggcgacatgccgctggagctacagcctaaattgttgcgtgttctacaggagcag
gagtttgaacggctcggcagcaataaattgatccagacagacgtgcggctgatcgccgcc
actaatcgcgatctgaaaaaaatggtcgccgatcgtgaattccgtaatgatctctactat
cgactgaacgtttttcccattcagcttcctccattacgcgaacgcccggaagatattccg
ctactggttaaagccttcacctttaaaatcgcccgccggatgggccgtaatatcgacagc
atccctgccgaaacgttgcgtacactcagcagcatggaatggccgggcaatgttcgcgaa
ctggaaaatgtcattgagcgcgctgtcctgttaacgcgcggcaatgtgctacaactgtcg
ctgccggatatcagcgccctggcgcccgataccgcgcccgttgccacggaaatcgccaaa
gagggcgaagatgaataccagcttattatacgcgtcctgaaagagactaacggcgtagtg
gccggtccgaagggcgccgcgcaacgcctggggcttaaacgcaccactctcctgtcacgc
atgaaaagactcggcattgataaggatgcgttagtgtaa
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