Salmonella bongori serovar 48 z41 --: N643_12440
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Entry
N643_12440 CDS
T03249
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbv03016
]
N643_12440 (truD)
Enzymes [BR:
sbv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
N643_12440 (truD)
Transfer RNA biogenesis [BR:
sbv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N643_12440 (truD)
Prokaryotic type
N643_12440 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AID25739
LinkDB
All DBs
Position
complement(2654643..2655692)
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AA seq
349 aa
AA seq
DB search
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGNNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVHQRLTKPDFNQVVDGDALQLAGRGSWFVATTEE
LPELQRRVDEKALMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVREVINTVGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgataatctcacctggctgcacggaaaaccacaaggtagcggattgcta
aaagccaatccggaagattttgtggtggttgaagatctgggcttcacgccggatggtgaa
ggcgagcatattctggtgcgtattttgaaaaacggctgcaacacccgttttgtcgcggac
gcgctggcaaagttcctgaaaatacatgctcgcgaagtcagtttcgccgggcaaaaagat
aaacacgctgttaccgagcagtggttgtgtgcgcgcgtgccgggtaaagagatgcccgat
tttagcgcgtttcagctggaaggttgcaaagtgctggaatacgcgcgtcacaagcgtaag
ctgcgtttaggcgcactgaaaggcaatgcctttacgctggtgttgcgcgaaataagcgat
cgccgcgatgtcgaaacacgattgcaggcaattcgcgacggcggcgtgccgaattatttt
ggtgcgcagcgtttcggcattggcggtaacaacctgcagggcgcgctgcgctgggcgcaa
agtgacgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcgcgtagc
gcgttgtttaatcaaattgttcaccagcggctgacaaaaccagactttaatcaagttgtt
gacggcgatgcgctacaattagccgggcgcggaagttggtttgtcgcgacaactgaagag
ctgcctgaattgcagcgccgggtagacgaaaaagcgctgatgattacggcgtcgctacct
ggcagtggagagtggggaacacagcgggaggcgctggcgtttgagcaggacgctattgct
caggaaaccgtgctgcaatcgctgctgttgcgcgaaaaagttgaggcgtcgcgcagagcg
atgctgctttatccgcaacaattgagctggaactggtgggatgacgttaccgttgagtta
cgtttctggttgcccgcaggcagctttgccaccagcgtagtaagggaagtgatcaacaca
gtgggtgattatgcgcatattgctgagtaa
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