Salmonella bongori serovar 48 z41 --: N643_14780
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Entry
N643_14780 CDS
T03249
Name
(GenBank) regulatory protein
KO
K18765
RNase E specificity factor CsrD
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbv03019
]
N643_14780
Messenger RNA biogenesis [BR:
sbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N643_14780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
AID26066
LinkDB
All DBs
Position
complement(3146146..3148086)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAVQYKYISRVQAAATAMDTHLVTRDIVS
LTPQIDELMIASDIVRVDLLQGKHPVYSHSRAASYQPAGANDMYRELVVPLVKHPGMSLR
LVYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQRQLSGQELLEIRSTRILNGER
GSNVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDTLIRSYAAQDTKTGLGNRLFFDN
QLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGNQAEEQMFMLINLLSTFIMRYPGSL
LARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDALPANKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAAARNAALQGGNSWAIYDDTLPEKGRGNVRWRTLIEQMLNRGGPRLYQKPAV
TREGRVHHRELMCRIYDGKEEVSSAEYMPMVLQFGLSEEYDRLQISRLITLLGYWPDENM
AMQLTVESLIRPRFQRWIRDTLMQCEKSQRKRIIIELAEADVCQHISRLQPILRLVNALG
VRVAVTQAGLTLVSTSWIKALNVELLKLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQV
YATGVRSRGEWQTLTKRGVAGGQGDFFASSQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttgtcactctgctcacggggttaacgatcttt
gtgactctgatcggctgttcgctaagtttttataatgccgtacagtataagtatataagc
cgtgtgcaggcagcggcgacggcgatggatacgcacctggtgacccgtgatattgtctcg
ctgacaccgcaaatcgacgaactcatgatcgcttccgatattgtgcgtgtcgatctgttg
cagggtaagcatcctgtctacagtcattctcgcgccgcaagttaccaaccagcgggtgcc
aacgatatgtaccgcgagcttgttgtgccgttggtaaaacatcctgggatgtcgctacgc
ctggtttatcaggacccgatgggcaactattttcactcactgatcactacggcgccgctg
acgctggcgataggctttatcgttctgatcctgtttttatcggtgcgctggctgcaacgg
cagctttccgggcaagagcttctggaaattcgctcaacgcgtatcctgaacggcgaacgt
gggtcaaatgtccgtggttccgtttatgaatggccggcacgcaccagcagtgcgcttgat
gtgttgctttctgaaattcagtttgctcatgaacagcgtagtcgactggatacgctaatt
cgttcctatgctgcgcaggacaccaaaaccggcctcggtaatcgcctgttctttgataat
caactggcgacgttactggaagaccaggaaaaggtcggggtacatggcgtggtaatgatg
atccgcttgccagacttcaatcttctacgcgacagcctgggaggcaatcaggcggaagag
cagatgtttatgctcatcaatctgctctcgacatttattatgcgctatcccggttcgctg
ctggcgcgctatcaccgtagcgactttgcggtattgttaccgcaccgcacgctgaaagaa
gcggaaagcattgccgggcaacttttaaaagccgtcgatgcgttaccagctaacaaaatg
ctcgatcgtgacgatatggtacatatcggcatttgtgcctggcgtagcggacaatctacc
gagcaggtgatggaacatgcagaagccgcagcgcggaatgccgccctacagggggggaat
agttgggctatctacgatgacacgctgccggagaaggggcgcggcaatgtccgctggcgc
acactgattgagcagatgctaaaccgtggcgggccacgactttatcaaaaaccggcggta
acgcgggaaggtcgcgtgcatcatcgggaattgatgtgccgcatctatgacggtaaagaa
gaggtcagctcggcggaatatatgccgatggtgctgcaatttggattgtcggaagagtat
gaccgattgcaaattagccgcctgattacgctactgggctactggccggatgaaaatatg
gcgatgcagttgacggtagagtcgctgattcgcccgcgttttcagcgctggatacgcgat
acattgatgcagtgtgaaaaatcacagcgaaaacgcataattattgaacttgcggaggcg
gatgtttgtcaacacatcagtcggttacaacctatccttcgcctggtgaatgcgcttggc
gttcgggtggcggtaacgcaggcgggtttgacgttggtcagtaccagttggattaaagcg
ctcaatgtggaattactgaagctgcatccgagcctggttcgaaatattgagaagcgaacg
gaaaatcagcttctggttcaaagcctggtagaggcttgcgccggtacgcctacgcaggtt
tatgcgacgggcgttcgttcgcgcggcgagtggcagacactaaccaaacgtggtgtggct
ggcgggcagggtgatttttttgcctcctcccaaccacttgacacaaacgtgaaaaaatat
tcgcaaagatattcggtttaa
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