Salmonella bongori serovar 48 z41 --: N643_15960
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Entry
N643_15960 CDS
T03249
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
N643_15960
Enzymes [BR:
sbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
N643_15960
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AID27585
LinkDB
All DBs
Position
complement(3387329..3389335)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMNALSTLVTIYLLLSLMLTVAIAWCVNR
LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQSEEQTD
NAMRFPVSDLPNKAFLMGLLEQVVTRQQTTALIVVTCETLRDTAGVLKETQREILLLTLV
EKLKSVLSPRMVLTQISGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQSIQLRPSC
SIGIAMYYGDLTAELLYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL
DNHQFAVWLQPQVEMSSGKVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPIDILKIDKMFVDALPED
NSMVTAIILMARSLNLQLVAEGVENDAQREWLEQAGVNVAQGFLFARPVPADIFEERYLP
HVNPDYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcgttaacaattaaacagatggcaatggttgcggccgttgtcatg
gtgtttgtttttgtcttttgcaccgttctgctgttccatttggtacagcagaaccgctac
aacacggctacgcaactggaaagcatcgcgcgatctgtccgggaacccctttcttccgct
attttaaaagcggatcttcctggcgcggagaccattctggaaagcataaaaccggcgggg
gtggtgagtcgcgccgatgtggtattaccgaatcagttccaggcgctacgtaagcgcttt
attcctgaacgtcccgtgccggttatggtgacgcggctcttcgaattgccggtacaaatt
tctctgccggtctattcgctggagcgaccggctaacccgcagcctctggcctaccttgta
ttgcaggcggattcgtaccgcatgtacaagttcgttatgaacgcgctgtctacgttagtg
accatttacttacttttatcgctgatgctgacggtggcgatcgcctggtgtgtcaatcgc
ctgatcgtgcatccgttgcgcaaaatcgcccgggagctgaacgacataccgcagcaggag
cttatcgggcatcagctggcgttgccgcgcctgcaccaggatgatgagatcgggatgctg
gtgcgcagctataacctcaaccagcaactgatgcagcgtcaaagcgaagagcaaacagat
aacgcgatgcgttttccggtttccgatctgcctaataaagcctttttaatggggctactt
gagcaggtggtcacccgccaacagacaacggcgctgatcgttgtcacctgtgaaactttg
cgtgatacggcgggtgtgctgaaagagacgcagcgggagattctcttgcttacgctggtg
gaaaaactgaaatcggtgctgtcgccgcgcatggtgcttacccagatcagcggttatgac
tttgctattatcgcccacggcgttaaagagccgtggcacgccatcacattaggtcagcaa
atactcactatcattaatgaacggcttcccatccaaagtattcagttgcgcccaagctgc
agtattggcatcgcgatgtattatggcgatctgacggctgagctgctttatggccgcgcg
gtttccgctgcatttaccgcgcgccgaaaaggtaaaaatcagatccagttctttgatccg
gcgcagatggaggctgctcaacagcgtcttaccgaagagagcgatattcttaccgcgctg
gataatcatcaattcgcagtgtggctacagccacaggttgagatgagtagcggcaaagtg
ttaagcgccgaagccttattacgtatgcagcagccggacggtagctgggaattgccggaa
gggctaattgagcgcattgagtcctgtggtctgatggtcacggtaggccattgggtgctg
gaagagtcctgccgtcagcttgccgcctggcaggagcgcggcgtaacgctgccgctctcc
gtcaatctttccgcgttacaactgatgcaccctggcatggtgtcagagctgctggaattg
ttaaaccgttatcgtattcagccaggtacgctgattcttgaagtcactgaaagccgccgt
atcgacgatccgcacgctgctgtcgccatactgcgtccgttacgaaacgcaggtgtgcgt
atcgcactggatgattttggcatgggctacgcgggactgcgccagctacagcacatgaag
tcgttaccgatcgatatccttaaaattgataaaatgtttgtcgatgcgctaccagaagat
aacagtatggtgacggccattattctgatggcccgcagcctgaatttgcaattggttgcg
gaaggcgtggagaacgatgcacaacgtgagtggctggagcaagctggcgtcaacgtggcg
caaggcttcctgtttgctcgccccgtcccggcggatatctttgaagaacgctatttgccg
cacgtaaatcctgattacaaaagttaa
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