Salmonella bongori serovar 48 z41 --: N643_16650
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Entry
N643_16650 CDS
T03249
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
sbv
Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbv03000
]
N643_16650
Transcription factors [BR:
sbv03000
]
Prokaryotic type
Helix-turn-helix
Other families
N643_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
NACHT
AAA_16
Mg_chelatase
AAA_14
HTH_Crp_2
AAA_2
TrmB
IstB_IS21
AAA_24
AAA_7
nSTAND3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AID26355
LinkDB
All DBs
Position
complement(3542019..3544817)
Genome browser
AA seq
932 aa
AA seq
DB search
MRRIEIVLGELERLTRGLCLADLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVYFLHRQALETLLGRQLEESEREVRTVADVLPHEAHYAPDDPFSSLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACEQSSGAIPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKTGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGVSSQPRSISVRLICATTEPVGSALLRTFQRRIQVSIDLPGIRQRSVEEQIELIVGF
LQRESRKIERTISIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHSDTLQLD
KRLADMPVNPTPEQRLLVDTLFDGKARLSVDARTLPALKTSLATGAEIEESDLFYSFLTR
EYVNLRNSNVPPAQTLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEESVTLLIGSVEQ
VLGFTLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNAVLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVNRVLEREL
FSAIDMPFEQSVHDTLETLTRLIQIRQYRRLILLVDIGSLIHFGSTISKLFQIDVLLMPN
ITLTTLLEVGLDLSYETSDLPQLAALLESKNVPCQLCTPQQESGGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQALNASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVFNHLTSALSLKPGRQVTLRFLIHCCCMVERIVINRKPLQMALENKPDLDINAF
SVIKSAFQPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtattgagatcgtactgggagagctggaacgccttacgcgcgggctatgtctt
gccgatctggcgcaggagacagcgtttacggcggaggcgataggttttaatcttgggctg
gcgcgtaattccgtcagtaaagatctcaatcagttatggaatgacggtctggcgatcaaa
agccgtggccgcccggtctattttttgcatcgccaggcgctggaaacgttgctgggacgc
caactggaggagtctgaacgcgaagtgcggacggttgcggatgtgctgccgcatgaagcg
cattacgcgccagacgatccgttttccagtctgattggttacgatcgcagcctgcgcgat
gcggtggaaaaaggccgcgcggcggtactctatccacacggtttacatgttctgctcacc
gggccgtccggcgtcggtaaaaccttttttgcggaactgatgcaccgcttcgcctgtgag
cagtcgagcggcgctatcccgccgctggtctactttaactgcgcggaatacgcccataac
ccggaacttctctcctcgcatctgtttggacatcggcagggggcgtttaccggggcgaat
gaaaataaaacgggtctggtggaacaggctgacggcggttatctgttgcttgatgaagta
catcgcctgccgtatgaaggccaggagaaactgttctcgattctggataaaggcgagtat
cgtccgcttggcgtgagtagccagccacgatcaatttcagtacgcctgatttgcgccacg
acggagccggtcggttcggcgctgttacgtaccttccagcggcgtattcaggtgagtatt
gatttaccgggtattcgccagcgctctgtagaagaacaaatcgaattgattgtgggtttc
ttgcagcgggaaagccgcaaaatagaacgcacaattagcattgataaaacattactgctc
tggttactgaataaacctctggaaggcaacatcggtcagcttaaaagcgatatccagttt
ctgtgcgcccaggcgtgggcatcgggaatgaccgaacatagcgacacgctacagctggat
aaacggctggcggatatgccggttaacccgacgccggaacaacggctcctggtggatacc
ctgtttgacggcaaagcgcggctgagcgtagatgcgcgtacgctgccggcgttaaaaacc
tcactggcgaccggggccgaaattgaagagagcgatctcttttacagcttcctgacgcgt
gaatatgtcaacctgcgcaacagtaatgttccaccagcccagacgctggctatcctgaaa
aataaactcagttcgatttttgaatatggtctctacagccgcgacagcgtggcgcatcca
ccgcgctatggtgatcaaattgaagagagcgtgacgttgctgattggcagtgtggagcag
gtgctgggctttacgctaccggagaatctggttaacccgctacgtaaacacttcctggcg
ctgataggctatgtgcagcgtggcctgatcccgcaactttactcttccagtttgattctg
gatcgttgcaaagacgaatatgacaatgccgtgttgctgtgccggaaaatcaatgaattg
ctgcatattcagtgtccggcgacggaagtggtctggctatgcctgttcctgaaagagtgt
cgccactatcgccaacgcattgacgccagcccggattgcggggtcattttgatcgctcac
ggcgcaaccaccgccacgagtcaggcgcagtatgtcaatcgcgtgctggagcgcgagtta
ttcagcgctatagatatgccctttgagcagtcggtacatgacacgctggaaacgctgacc
cggctcattcagatccgacaatatcggcggcttattctgctggtggacatcggctcattg
atccatttcggtagcacgatcagtaagttattccagatagatgttctgcttatgccgaat
atcacgctcaccactctattggaggtagggctggatttaagctatgaaaccagcgactta
ccgcagctggcggccctcctggagagtaaaaatgtcccctgccagctttgtacgccgcaa
caggagagcggcggtaaagtgctggtgatctcctgtattaccggcatggggacggcggaa
aaaatcaagaaagtactggaagaaagttttggcgaattgatgtcgcaggacaccagaatg
gtaatccttgattataacgaggtgcgcagtctggagcgcgttcaacaggcgttgaacgcc
agcgagcggctggcgggaattgtcggcaccttccagccgggactgccggatattccgttt
atctcactggaagagttgttctccgagcaggggccggagctggtattaagtttgttaacg
cccgatctctccagtgctgaacgccggctggagatggagcgtagcgcgatgcgctttatc
agcgcgctgacgatggagagtattattaaccatatttcggtgctcaacccgcagcgtatt
ctgaaagaaatggaaggcgtttttaaccatttgacctctgcactttcactgaaaccaggc
cgtcaggtgacactgcgcttcctgatccactgctgctgtatggtagagcgtattgtgatt
aaccgaaaaccgttacagatggcgctggaaaacaagccggatctcgatattaatgcgttt
agtgtcattaaatcggcctttcagccgatagaagaggcttatgccatccgcttatcggat
gcggaatatttttatatctacgaactgctctatagctaa
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