Salmonella bongori serovar 48 z41 --: N643_18075
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Entry
N643_18075 CDS
T03249
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbv
Salmonella bongori serovar 48:z41:--
Pathway
sbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N643_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbv03400
]
N643_18075
Enzymes [BR:
sbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N643_18075
DNA repair and recombination proteins [BR:
sbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N643_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AID26563
LinkDB
All DBs
Position
complement(3834571..3836769)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAHVALPVPLPRTFDYRLPDGWDVKAGCRVRVPFGKQQERVGIVVSVSDHSELPLNEL
KSVIEILDNEPVFSPSVWRLLLWATEYYHHPIGDVLFHALPILLRQGKPASNAPLWYWFA
TEEGLALDINSLKRSPRQQQALAALRQGKIWRYQVAECDFTDATLQTLRRKGLCELASET
PAFTDWREHYAVAGERLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLEN
ILAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQRKYRLLRLTRRAGNARPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLHKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQASVFLQQLRNLI
QASPLADDKLWLLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIISGTLVLINTLPEARK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattaccggctg
ccggatggctgggacgtcaaagccgggtgccgcgtacgcgtgccgttcggcaagcagcaa
gagcgtgtgggcattgtcgtttcagtcagcgaccacagcgaattaccgcttaatgaatta
aagtcggtcattgaaattctggataacgaaccggtcttttccccctccgtctggcgttta
ctcctctgggcgacggagtactaccaccatcctatcggcgacgttctgtttcacgcccta
ccgattttattacgccaggggaaaccggccagcaacgcgcccctttggtactggtttgct
accgaagaggggctggcgctcgatattaacagtctgaaacgttcgccaaggcaacagcag
gcgctggcggcgctacggcaaggcaagatttggcgctatcaagtggctgaatgcgatttt
accgacgccacactgcaaacgctgcgacggaaagggctttgtgagctcgccagtgaaaca
cctgcgtttaccgactggcgagagcattatgccgtcgcaggggagcggctgcggctcaat
accgagcaggcgacggcggtcggcgcgattcacagcgcatcagatagcttctccgcctgg
ctgctggcaggcgtcacaggttccggtaagacagaagtgtatctgagcgtgctggaaaac
atcctcgcgcagggtaaacaagcgttggtgatggtgccggaaatcggcctgacgccgcaa
acaatcgcccgttttcgcgaacgttttaacgcgccggtggaagtgctgcattccgggcta
aatgatagtgagcgtctttcggcatggctgaaagcaaaaaacggcgaagcggccattgtc
attggcacacgttcctcgctttttacgccgtttaagaatcttggcgtcattgtcatcgat
gaagagcacgacagttcttataaacagcaggaagggtggcgctaccatgcccgcgatttg
gcggtgtatcgcgcccatagtgaacaaattccgattattctcggctccgccacgccagct
ctggaaacgctctgcaacgtacggcaaagaaaatatcggctgctgcgtctgacgcgacgc
gcgggcaacgctcgaccggccctgcagcatgtgctggatttaaaaggccagcgtctccag
gcagggctcgcccccgcccttatcgcccgtatgcgccaacatctccaggccgacaatcag
gtgattttatttctgaaccgccggggattcgcgcccgcgctgctgtgtcacgattgcggc
tggattgcggagtgtccgcgctgcgatcattactatacgctgcaccaggcgcagcatcat
ctgcgctgccaccactgcgatagccagcgtcccgtgccgcgccagtgcccctcctgcggt
tccacgcatatgctaccggttgggttagggacggaacaactggaacaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgataccaccagtcgcaaaggcgcg
ctggagcagcatttagcggaggttcaccgtggcggagcgcgcatcctgataggcacgcaa
atgctggcgaaaggccatcatttcccggacgtcactctggtggcgttactggacgtcgat
ggcgcgcttttttccgccgattttcgttcagcggaacgttttgcccagctctacactcag
gtttcaggacgcgccgggcgcgcgggtaaacaaggtgaagtggtgctacaaacgcatcat
cctgagcatcccctgctgcaaacgttactgcataaaggctatgatgcatttgcggaacag
gcgctggcggaacggcaaacgcttcaactcccaccatggaccagccacgtcattatacgc
gcagaggatcataataatcagcaggcgtcggtcttcctccagcaactgcgtaacttgatt
caggccagcccgctagcagacgataaactatggttattaggtccagttccggccctcgcg
ccaaaacgtggtggtcgctatcgctggcaaatattactgcagcatccttcgcggattcgc
ctgcaacacatcatcagcgggacgctggtgttgattaatacgcttcctgaggcacgaaaa
gttaagtgggttcttgacgtcgatccaattgagggatag
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