KEGG   Salmonella bongori serovar 48 z41 --: N643_19065
Entry
N643_19065        CDS       T03249                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
sbv  Salmonella bongori serovar 48:z41:--
Pathway
sbv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sbv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    N643_19065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sbv02044]
    N643_19065
Secretion system [BR:sbv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N643_19065
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484
Other DBs
NCBI-ProteinID: AID27727
LinkDB
Position
complement(4087710..4089746)
AA seq 678 aa
MQTATAVTAFSLYQSHSTPFVLEADIASGLPDLVAADFLEKNAILTLWQGTEALRHVSGI
ISEVSLGENNHWQMRYHLTIVPPLWRCGLRQNFRIFQQQDIRTISSTLLSENGVTAWTPV
FYDPHPAREFCVQYGETDLAFLTRLWAEEGIFYFDWHAPEGPAQKLVLCDDAAGVSSLGE
IPFNPDTATEVSTACISSFRYRARTGPSSVEIQDYTFRTPAWPGYYSHAAENLNGQFTRY
EIFDYPGRFKDESHGRAFARYRTEGWRHDTETATCISNSPKLYPGKRFTLTGHPSGTLNR
EWQVVSGVLTGSQPQALHGSPDEGTTLENHFDVIPADRTWRAPPLPKPAVDGPQSAIVTG
PAGEEIFCDEHGRVRVRFHWDRYCPGNEDSSCWIRVSQAWAGTGFGNLAIPRVGQEVIVD
FLNGDPDQPIIMGRTYHQDNRSPGSLPGTKTQMTIRSKTYKGDGFNELRFEDATGQEQVY
IHAQKNMDTEVLNNRTTDVKVNHTETIGANQVITVKQNQVQTVVQNQQETVGQNQSVTVG
LNQAETVGIVRALSVGVAYQTTVGGVMNTSVALMQSSQVGIQKSLLVGKGYDVSVGENVT
FSVGKSRKESAGKVAVYSAGEHLELVCGQARLVLTQDGGIFLNGTAIHLQGAQAISGDGP
VINWNCGVAKNPPDAPEQ
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgcagacagccaccgctgtcacggccttcagcctttaccagtcacattccacgcctttt
gtccttgaggccgacatcgccagcggcctccctgaccttgtggcagccgacttcctcgaa
aagaatgccatactgaccctctggcagggaactgaggctctgcgccatgtcagcggtatc
atcagcgaagtctcgcttggtgaaaacaaccactggcagatgcgttatcacctcaccatt
gtccctcccctctggcgctgcggcctgcgacagaacttccgtatcttccagcagcaggat
atccggaccatctcctccaccctgctcagtgaaaacggcgtcacggcgtggacaccggta
ttttatgacccgcatccggcacgtgagttctgcgtacagtacggcgaaaccgacctcgcc
ttcctgacccgcctgtgggcggaggaaggtatcttttactttgactggcacgccccggaa
ggcccggcgcagaaactggtactctgcgacgatgccgccggggtgtcatcgctgggggag
ataccctttaaccctgataccgccacggaagtctccaccgcctgtatcagcagtttccgg
taccgggcgcgcaccgggccctcctccgttgaaatccaggactacaccttcaggacaccc
gcctggccgggttattacagccacgccgctgaaaacctcaacggccagtttacccggtat
gaaatctttgattatcctggccgcttcaaggacgagtcccatggccgggcgtttgcacgc
taccggactgaaggctggcggcatgatacggaaacggctacctgtatcagcaactcaccg
aagctgtatccgggcaaacgcttcaccctgaccggacatccctcagggacgctgaaccgg
gaatggcaggtggtcagcggtgtgctgaccggcagccagccgcaggcgctgcacggcagc
cctgacgaaggcaccaccctggaaaaccactttgatgtcatcccggccgacagaacctgg
cgcgcccctcccctgcccaaacccgccgtggacggcccccagagcgccattgtcaccggg
cccgcgggcgaggaaatcttctgcgatgagcatggccgcgtgcgggtgcgttttcactgg
gaccgttactgtccgggaaatgaggacagctcctgctggatacgggtgtcgcaggcctgg
gcgggtaccgggtttggtaacctcgccattccgcgcgtgggccaggaagtgattgtggac
ttcctcaacggcgacccggaccagcccatcatcatgggacgcacctaccaccaggacaac
cgttcgccgggcagcctgccggggacgaaaacacagatgaccatccgctcgaaaacctac
aagggcgacggctttaacgagctgcggtttgaggatgcgacgggccaggaacaggtctat
atccatgcgcagaagaacatggacaccgaggtgctgaacaaccgcaccaccgatgtaaag
gtcaaccataccgaaaccattggcgcgaaccaggtgattaccgttaagcaaaatcaggta
cagacggtggtgcagaaccagcaggaaacggtgggccagaatcagagtgtcaccgtgggg
ctgaatcaggcggaaacggtggggattgtccgtgccctgagcgttggcgtggcataccag
accaccgtgggtggggtgatgaatacctccgtggcgctgatgcagtcctcacaagtcgga
attcagaaatccctgctggtcggtaaaggatatgacgtcagcgtgggggaaaacgtcacc
ttctcagtggggaaaagccggaaggaaagcgccggaaaggtggcagtctacagcgccggg
gagcaccttgaactggtttgcggtcaggcccggctggtgctgacgcaggacggcggcatc
ttcctgaacggcacggcgattcatcttcagggcgcacaggccatcagcggcgacgggccg
gtgattaactggaactgcggggtggcgaaaaatccgccggacgcgccggagcagtaa

DBGET integrated database retrieval system