KEGG   Salmonella bongori serovar 48 z41 --: N643_19600
Entry
N643_19600        CDS       T03249                                 
Name
(GenBank) pirin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sbv  Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:sbv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbv03016]
    N643_19600
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbv02048]
    N643_19600
Transfer RNA biogenesis [BR:sbv03016]
 Prokaryotic type
  tRNA degradation factors
   N643_19600
Prokaryotic defense system [BR:sbv02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    N643_19600
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: AID26774
LinkDB
Position
complement(4191606..4192022)
AA seq 138 aa
MSKTYMLDTCICSFIMREQPEAVLKRLEQTVLRRHRIVVSAITYAEMRFGCTGKKASPRH
AQLVDAFCSRLDAVLAWDRAAVDATTEIRAVLAAAGTPIGSNDAAIAGHAIASGAILVTN
NVREFERVPGLQYEDWVK
NT seq 417 nt   +upstreamnt  +downstreamnt
atgagtaaaacctacatgctggatacctgcatctgttctttcattatgcgtgagcagccg
gaagctgtgctgaaacgccttgaacagaccgtgttgcgccgccatcgtattgtggtgtcg
gcgattacctacgccgaaatgcgttttggctgtacgggcaaaaaggcctcgccgcgccat
gcccaactggtcgatgcattctgtagccgtctggatgccgtgttggcgtgggaccgggcg
gcagtggatgccaccacagagatccgtgccgtactggccgccgccggtacgccgattgga
tcaaacgatgcggctatcgccggccatgccattgcgtccggggcgatactggtcactaat
aacgtgagggagtttgagcgggtaccgggtttgcagtacgaagattgggtaaaataa

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