Candidatus Tachikawaea gelatinosa: TGUWTKB_0340
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Entry
TGUWTKB_0340 CDS
T03624
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TGUWTKB_0340 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbw03019
]
TGUWTKB_0340 (orn)
03009 Ribosome biogenesis [BR:
sbw03009
]
TGUWTKB_0340 (orn)
Messenger RNA biogenesis [BR:
sbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TGUWTKB_0340 (orn)
Ribosome biogenesis [BR:
sbw03009
]
Eukaryotic type
Pre-60S particles
RNases
TGUWTKB_0340 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAP58294
UniProt:
A0A090AL23
LinkDB
All DBs
Position
40678..41229
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AA seq
183 aa
AA seq
DB search
MNKKNEKNLIWIDLEMTGLNPEKDRIIEIVTLITDSDLNILAEGPTLAIHQTDEVLENMD
QWNKKTHSHTGLIEKVKSSNYNEKLAQDLTINFIKKWVPEKKSPICGSTIAQDRRFLFKY
MPHLESYFHYRYIDVSTIRELAVRWKPEILISIKKKSKHQALFDIRESVAELNYYRKFFF
TKK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaaatgaaaaaaatttaatttggattgatttagaaatgactggtttaaac
ccagaaaaagatcgtataattgagatcgttactctaattactgatagtgatttaaatatt
ttagcagaaggacctacattagcaatacatcaaacagatgaagtattagaaaatatggat
caatggaacaaaaaaacacattcacataccggattaatagaaaaagtaaaatctagtaat
tataatgaaaaattagctcaagatttaacaataaattttataaaaaaatgggtgccagaa
aaaaaatctcctatttgtggaagcacaatagcacaagatagacgttttttatttaaatat
atgccacatttagagtcctattttcattaccgttatattgatgtaagtactattagagaa
ttagcagtgcgttggaagccagaaattttaatatcaattaaaaaaaagagtaaacatcaa
gctttgtttgatattcgagaatcggttgcagagttaaattattatcgaaagtttttcttt
actaaaaaataa
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