Candidatus Tachikawaea gelatinosa: TGUWTKB_0780
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Entry
TGUWTKB_0780 CDS
T03624
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw03030
DNA replication
sbw03430
Mismatch repair
sbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TGUWTKB_0780 (dnaQ)
03430 Mismatch repair
TGUWTKB_0780 (dnaQ)
03440 Homologous recombination
TGUWTKB_0780 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbw03032
]
TGUWTKB_0780 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sbw03400
]
TGUWTKB_0780 (dnaQ)
Enzymes [BR:
sbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TGUWTKB_0780 (dnaQ)
DNA replication proteins [BR:
sbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TGUWTKB_0780 (dnaQ)
DNA repair and recombination proteins [BR:
sbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TGUWTKB_0780 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAP58337
UniProt:
A0A090APX2
LinkDB
All DBs
Position
88691..89419
Genome browser
AA seq
242 aa
AA seq
DB search
MNIINNRQIVLDTETTGMNTIGAHYEGHRIIEIGAVEIINRQLTGKNFHVYLKPNRLVDI
KAFNIHGISDNFLSNQPKFNEVAKSFFKYIVNTELIIHNAAFDIGFIDYEFSLLMKKKFK
LENFCKITDSLKIARKLFPGKRNSLNALCSRYNINNNKRILHGALLDAEILAQVYLLMTS
GQISFSFHQRKSYDKDIDYNKIHKKNKVLNLPIIYAKTNDIEQHIKLLKIIKKTNKNCLW
NS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatcaataatcgtcaaattgttttagatactgaaacaactggaatgaatact
attggtgcacattatgaaggacatcgtattattgaaattggagcagtagaaattattaat
cgtcagttaacaggaaaaaattttcatgtttacttaaaacctaatcgtttagtagatatc
aaagcatttaatatacatggtatatcagataattttctttctaaccaaccaaaattcaat
gaagttgcaaaaagtttttttaaatatattgtgaatactgaactgattattcataatgca
gcttttgatataggatttattgattatgaattttcattattaatgaaaaaaaaatttaaa
ttagaaaatttttgtaaaataactgatagtctaaagatcgcaagaaaactgtttccagga
aaaagaaacagtttgaacgcgttatgttcacgttataacattaataataataaacgtatt
ttgcatggagctttattagatgctgaaattcttgcacaagtttatttattaatgacaagt
ggtcaaatatctttttcctttcatcaaaggaaaagttatgataaagatattgattataat
aaaattcataaaaaaaacaaagtattaaatttacctataatatatgcaaaaaccaatgat
attgaacaacatataaaattattaaaaattataaaaaaaacaaataaaaattgtttatgg
aatagttga
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