Candidatus Tachikawaea gelatinosa: TGUWTKB_1230
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Entry
TGUWTKB_1230 CDS
T03624
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw03420
Nucleotide excision repair
sbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TGUWTKB_1230 (uvrD)
03430 Mismatch repair
TGUWTKB_1230 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbw03400
]
TGUWTKB_1230 (uvrD)
Enzymes [BR:
sbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TGUWTKB_1230 (uvrD)
DNA repair and recombination proteins [BR:
sbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TGUWTKB_1230 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TGUWTKB_1230 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
PhoH
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAP58381
UniProt:
A0A090BWC8
LinkDB
All DBs
Position
complement(119579..121705)
Genome browser
AA seq
708 aa
AA seq
DB search
MNVSHLIIDLNQKQKEAVLSQAKNLLVLAGAGSGKTRVLVYRIARLISEKNNINSIMAVT
FTNKAALEICNRIKKIKILKNFERKEMWIGTFHSLSYRLLRIHYSDADLPKNFQILDRDD
QLSLLISIIKEMNIDEKKISINKILSYINKRKDEGKRTYHIQCQSELMNLTLLKIYKKYE
EICKNSGLVDFSELLLRTYELFLKKPYILKYYRKRFSNILIDEFQDTNGIQYQWIKILAG
KKSNIVVVGDDDQSIYGWRGAKIENVQHFINDFKNTQIIRLEQNYRSTKNILNLANTLIL
NNNNRLTKKLWTNDIKGELIKIYCAKNEVDEADFLIYEINNWIEKGQFLKDCAILYRNNV
QSRVVEEALIKNHIPYCIQGSMRFFEHQEIKYALAYLRIIFNKNDNLALEKIINVPARGI
GLQTFNLIIQQSKQKNLTFWKTIKFLLISNILTKKAFVSLENFYKLINSLSQELINVPLY
IQTKTVIKKSGLWCMYEKKKETSRIENLKELITATNQFNYEDKTMTPLQAFLAYTVLYST
ENKTDQESLKLMTIHASKGLEFKKVLVIGLEEGTFPKKTYENNELEEERRLAYVAITRAM
TQLTLSYSETKIIYGKKKFLEPSRFIKELPKAYLKPSPFKKNNIKYSKKENIFQYQKKQK
FKKGQKVKHKVFGFGIVLQIDNNEEQSKIEILFHDNSRRWILTDYIYI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttctcatttgattattgatttaaatcaaaaacagaaagaagctgtgctatct
caagctaaaaatttattagttttagcaggtgcaggaagtggtaaaacacgtgttttagtt
tatcgaattgctcgattgatttctgaaaaaaataacattaactctataatggcagtaact
tttactaacaaggcagctttagaaatttgtaatcgaattaaaaaaattaaaatattgaaa
aattttgaaagaaaagaaatgtggattggtacttttcatagtttatcatatcgattatta
cgtattcattattctgatgcagatttacctaaaaattttcaaattttagatcgtgatgat
caactttctttattaatatctattataaaagaaatgaatattgatgaaaaaaaaatttct
ataaataaaattttatcatatattaacaaaagaaaagatgaaggaaaacgaacatatcat
attcaatgtcaatctgagttaatgaatttaactttattaaaaatttataaaaaatatgaa
gaaatatgtaaaaattcaggattagttgatttttctgaattactcctgagaacttatgaa
ctatttttaaagaaaccatatattctcaaatattatagaaaacgtttttcaaatatatta
atagatgaatttcaagatactaatggaattcaataccaatggattaaaatattagcagga
aaaaaaagcaatattgttgtagtgggagatgatgatcaatcaatttatggatggagaggt
gcaaaaatagaaaatgttcaacattttattaatgattttaaaaatacacaaattattcgt
ttagaacaaaattatagatcaacaaaaaacattttaaatttagctaacactttaatttta
aataataataatcgtttaacgaaaaagttgtggacaaatgatataaaaggagaattaatt
aagatctattgtgcaaaaaatgaagtagatgaagcagattttttaatttatgaaataaac
aattggatcgaaaaaggacaatttttaaaagattgtgctattctttatcggaacaatgtt
caatctcgtgtagtagaagaagcgttaataaaaaatcatataccatactgcatacaaggt
agtatgcgattttttgagcatcaagaaataaaatatgcattggcttacctaagaataatt
ttcaataaaaatgataaccttgctttagaaaaaattattaatgtacctgcacgaggaata
ggacttcaaacatttaatcttattattcaacaatccaaacaaaaaaacttaacgttttgg
aaaactattaaatttttattaatatcaaatattttaacaaaaaaagcttttgtttcgcta
gaaaatttttataaattaattaattctttatcacaagaacttataaatgttcctttatat
atacaaacgaaaacagtaataaaaaaatctggtttatggtgtatgtatgaaaaaaaaaaa
gaaacatcaagaatagaaaatttaaaagaattaattacagcaactaatcagtttaattat
gaagataaaacgatgactccattgcaagcttttttagcttatactgtcttatattctaca
gaaaacaaaactgatcaagaatctttaaaattaatgactatacatgcttctaaaggatta
gaatttaaaaaagttttagtaataggtttagaagaaggaacatttcctaaaaaaacatat
gaaaataatgaattagaagaagaacgtcgtttagcatatgttgcaatcacacgtgcaatg
acacaactaactttaagttattcagaaacaaaaattatctatggaaaaaaaaaattttta
gaaccgtcacgttttataaaagaattacctaaagcatatcttaaaccatctccttttaaa
aaaaataacattaaatattctaaaaaagaaaatatatttcaatatcaaaaaaaacaaaaa
tttaaaaaaggacaaaaagttaaacataaagtctttggatttggaatagtactacaaata
gataataatgaagaacaaagtaaaattgaaattctttttcatgataatagcagaagatgg
atactgactgattatatatatatttaa
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