Candidatus Tachikawaea gelatinosa: TGUWTKB_2020
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Entry
TGUWTKB_2020 CDS
T03624
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TGUWTKB_2020 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbw01007
]
TGUWTKB_2020 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbw03016
]
TGUWTKB_2020 (hisS)
Enzymes [BR:
sbw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
TGUWTKB_2020 (hisS)
Amino acid related enzymes [BR:
sbw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TGUWTKB_2020 (hisS)
Transfer RNA biogenesis [BR:
sbw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TGUWTKB_2020 (hisS)
Prokaryotic type
TGUWTKB_2020 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2
VipB_2
Motif
Other DBs
NCBI-ProteinID:
BAP58446
UniProt:
A0A090BWE1
LinkDB
All DBs
Position
206551..207828
Genome browser
AA seq
425 aa
AA seq
DB search
MKNNKISAVRGMNDYLPQDTIILQTIENVLKKILNNYGYSEIRMPILEKTILFEKAIGTF
TDLINKEMYTFSDKKGKSITLRPEGTAGCVRSIIKNYHILNNYYNRLWYLGPMFRYERPQ
NGRYRQFHQLGVEVFGLEAPMIDAELIMMSSRFWKQLKILNYVTLHLNSIGSIEIRLKYR
NVLIKYLKSYEHKLDKKYKETIQKNPLRILDSKNPLVQEIVSNGPILLNYLDKKSHKNFD
ELCNFLNTNNIFYKIDPYLVRGLDYYNDTVFEWKTEKLGSQNAICSGGRYDNLIQHIDQK
KSISAIGFAIGIERLFLLIKNINNAFKYKKNISIYIVSLKKESNYFAIQLAEEIRNMKSM
FKIFTDLSGKNLKKQLIYANKFKINYIIIIDDKNIKKSKILFKDLNLNSQFFLSKNDLLK
KIFLL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataataaaatttccgctgttcgtggaatgaatgattatttacctcaagatact
ataattttacaaacaatagaaaatgttttaaaaaaaatattaaataattatggatattct
gaaattagaatgcctattttagaaaaaacgatattattcgaaaaagcaattggaacattt
acagatttaatcaataaagaaatgtatacatttagtgataaaaaaggaaaaagtattaca
ttacgaccagaaggaactgctgggtgtgttcgttcaattattaaaaattatcatatttta
aataattattataatcgtttatggtatctaggaccaatgtttcgttatgaacgtcctcag
aatggaaggtatagacagtttcaccaattaggagtagaagttttcggattagaggcacca
atgattgatgcagaattaattatgatgagttctcgattttggaaacagttaaaaatttta
aattatgttactcttcatttaaattctattggatccatagaaataagattgaaatatcgt
aatgttttaattaaatatttaaaaagctatgagcataaattagataaaaaatataaagaa
acaatacaaaaaaatccattacgaatattagatagtaaaaatccattagtacaggaaatc
gttagtaacggtcctattcttcttaattatcttgataaaaaatcacataaaaattttgat
gaattatgtaattttttaaatacaaataatattttctataaaatagatccttatttagtt
agaggattggattactataatgatacagtgtttgaatggaaaactgaaaaactaggttca
caaaatgctatttgttcgggaggaagatatgataacttaattcaacatattgatcaaaaa
aaatctatttcggctattgggtttgctataggaatagaaagattatttctactgataaaa
aatataaataatgcttttaaatataaaaaaaatattagcatttatattgtttccctcaag
aaagaaagcaactattttgctattcaattagctgaagaaattcgtaatatgaaatcaatg
tttaaaatatttacagatcttagcggaaaaaatttaaaaaaacagctcatatatgcaaat
aaatttaaaataaattatattataataatagatgataaaaatataaaaaaaagtaaaatt
ttatttaaagatttaaatttaaacagtcaattttttctatcaaaaaatgatcttttaaaa
aaaattttcttgttgtaa
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