Candidatus Tachikawaea gelatinosa: TGUWTKB_4960
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Entry
TGUWTKB_4960 CDS
T03624
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw00300
Lysine biosynthesis
sbw00470
D-Amino acid metabolism
sbw01100
Metabolic pathways
sbw01110
Biosynthesis of secondary metabolites
sbw01120
Microbial metabolism in diverse environments
sbw01230
Biosynthesis of amino acids
Module
sbw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TGUWTKB_4960 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TGUWTKB_4960 (lysA)
Enzymes [BR:
sbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TGUWTKB_4960 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAP58722
UniProt:
A0A090AQU7
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All DBs
Position
complement(525803..527059)
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AA seq
418 aa
AA seq
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MFTNIKKLLKIAKYYKQPFWVYDANIIYKKIHQLKLFDTIRFAQKSCSNINILKFMKNLN
VKIDAVSLGEIERALIAGYQTKNHDIVFTADLFDIPTLNRINELKIPVNAGSIDMLHQLG
RISPGHLIWIRINPGFGHGHNKKTNTGGINSKHGIWYTDVPIALSAIKKYQLRLIGIHMH
IGSGVNYYHLKKVCKKMEECVLSLNHDIKIISAGGGLTVPYKKTDKAIDTKHYFDLWNLS
RKKISSHLGHKVHLEIEPGRFLIAESGLLVTQVFAVKKIYKRYFVLVNAGFTELMRPLLY
GSYHNISIIKENGDHITEKKSSQTYNTVIGGPLCESGDIFTQTEDGTIKDRMMPKIVVGD
YLIFHNTGAYGASMSSNYNSRPLVPEIFFKENQFYEIRRSQTIQELLNLELNNRKIIF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaatataaaaaaattattaaaaatagcaaaatactacaaacaaccattttgg
gtatatgatgcgaatataatttacaaaaaaattcatcaactaaaattatttgatactata
agatttgcgcaaaaatcttgctcaaacattaatattttaaaattcatgaaaaatttaaat
gtgaagattgatgctgtatctttaggagaaattgaacgtgcactaatagctgggtatcaa
acaaaaaatcatgatattgtttttacagcagatttatttgatattcctactttaaatcgc
attaacgaattaaaaatacctgttaatgcaggttctatcgatatgttacaccaacttggt
agaatttcacctggacatttaatatggattagaattaatcctggttttggtcacggacat
aataaaaaaactaatactggaggtataaatagtaaacatggaatctggtatacagatgtt
ccaatagcattatccgcaattaaaaaatatcaattaagattaataggcatacatatgcat
attggttctggagttaattattatcatctaaaaaaagtatgtaaaaaaatggaagaatgt
gtactaagtttaaatcatgatataaaaattatttctgctggtggtggtttaactgttcct
tataaaaaaactgataaagctattgatacaaaacattactttgatttatggaatttatca
agaaaaaaaatatcatcccaccttgggcataaagttcatttagaaattgaaccaggtcga
ttcttgattgcagagtcaggattgctagtaactcaagtatttgctgtaaaaaaaatttat
aaacgatattttgttttagttaacgcaggttttacagaattaatgcgtccattattgtat
ggaagttatcataatatttctattattaaagaaaacggagatcatatcactgaaaaaaaa
tcatctcaaacttataacactgtaattggaggaccattatgtgaatcaggtgatattttt
actcaaactgaagatggaacaataaaagatcgcatgatgcctaaaatagtagttggagat
tatttaatttttcataacacaggggcgtatggtgcttctatgtcatctaattataatagt
cgacctttagtaccagaaattttttttaaagaaaatcaattttatgaaattcgtcgatct
caaacaatacaagagcttttaaatttagaactaaataatagaaaaattattttttaa
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