Candidatus Tachikawaea gelatinosa: TGUWTKB_5540
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Entry
TGUWTKB_5540 CDS
T03624
Symbol
lysU
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TGUWTKB_5540 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbw01007
]
TGUWTKB_5540 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbw03016
]
TGUWTKB_5540 (lysU)
Enzymes [BR:
sbw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TGUWTKB_5540 (lysU)
Amino acid related enzymes [BR:
sbw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TGUWTKB_5540 (lysU)
Transfer RNA biogenesis [BR:
sbw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TGUWTKB_5540 (lysU)
Prokaryotic type
Other AARSs
TGUWTKB_5540 (lysU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAP58780
UniProt:
A0A090ASC8
LinkDB
All DBs
Position
complement(588110..589633)
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AA seq
507 aa
AA seq
DB search
MLNKNLQKDREKLHISEEKEKEIRRKKLKNLRNSNDEIFPNDFRKNCIVSKLKKKYQNED
NQKLLNINVSIAGRIISKRIMGKASFAHIQDEGGKIQLYITCNSVNNNFYESFKKWDLGD
IIGAKGYLFKTKKGELSVHCLEIFQLTKALRPLPDKYHGLVDKEICYRKRYLDLIVNTKS
REKFKIRSKIFHYIRQFMSENNFLEVETPILQTIPGGASARPFITYHNSLNMDMYLRISP
ELYLKRLIVGGFERVFEINKSFRNEGLSTFHNPEFTMLELYIAYADYKDLMSFIENFFYQ
LTMNVLKKTIVKYGTETFDFSQKFIRMTMNEAIIKYNTKIKNINLDNFIEISNFATSIGI
SIERDWTVGNVIYEIFEKTVEKKLIQPTFITEYPIEVSPLAKRNTKKKSITDRFELFIGG
YEVGNGFSELNDAEDQKDRFKKQISTKEFNSINEHFFYDKDYIIALEHGLPPTAGLGIGI
DRLVMLLTNSQSIRDVILFPICRPDNK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaaaaacttacagaaagatcgtgaaaaattacacatctcagaagaaaaagaa
aaagagatacgtagaaaaaagctaaaaaatttacgtaattctaacgacgaaatttttcct
aatgactttcgtaaaaattgtattgttagcaaactaaaaaaaaagtatcaaaatgaagac
aatcaaaaattacttaatattaacgttagtattgctggacgaataattagcaaacgtatt
atgggtaaagcttcttttgcacatatacaagatgaaggaggaaaaattcaattatatata
acatgtaattcagtaaataataatttttatgaaagttttaaaaaatgggatcttggagat
attataggtgcaaaaggttatttgtttaaaacaaaaaaaggcgaactttctgttcattgc
ttagaaatttttcaattaactaaagctttacgtcctttaccggataaatatcatggtctt
gtagacaaagaaatttgttatcggaaacgatatttagatcttattgtaaacactaaatct
cgcgaaaagtttaaaatacgttccaagatttttcattatatccgtcaatttatgtcagaa
aacaacttcttagaagtagaaactccaattttacaaactattccaggaggagcatcagct
cgtccatttataacttatcataattctttaaatatggacatgtatttaagaatatctcca
gaattatatttaaaacgtttaatagtaggaggatttgaaagagtatttgaaataaataaa
agctttcgtaatgaaggtttatcaacctttcataatcctgaatttactatgttagaattg
tatatagcatatgctgattataaagatctaatgagttttatagaaaattttttttaccaa
ttaaccatgaacgttttaaaaaaaacaattgtcaaatacggaacagaaacttttgatttt
tctcaaaaatttataagaatgacaatgaatgaagctattataaaatataatacaaaaatc
aaaaatataaatttagacaattttattgaaatatcgaattttgcaacttctattggaatc
tctatagagagagattggactgttggtaacgttatttacgaaatttttgaaaaaactgtt
gaaaaaaaattaatacaacctacttttattacagaatatcctatagaagtctcgccttta
gcaaaaagaaatacaaaaaaaaaatctataactgatagatttgaattatttattggagga
tatgaagttggtaatggtttttcagaattaaatgatgcagaagatcaaaaagatcgattt
aaaaaacaaattagcacaaaagaatttaacagtataaatgaacactttttttatgataaa
gattatataattgctttagaacatggtttacccccaacagctggtttaggtataggaata
gatcgattagtaatgttattaacaaacagtcaaagtatccgtgatgttatattatttcca
atatgtcgtcctgataacaaataa
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