Candidatus Tachikawaea gelatinosa: TGUWTKB_6080
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Entry
TGUWTKB_6080 CDS
T03624
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw03030
DNA replication
sbw03430
Mismatch repair
sbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TGUWTKB_6080 (dnaX)
03430 Mismatch repair
TGUWTKB_6080 (dnaX)
03440 Homologous recombination
TGUWTKB_6080 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbw03032
]
TGUWTKB_6080 (dnaX)
03400 DNA repair and recombination proteins [BR:
sbw03400
]
TGUWTKB_6080 (dnaX)
Enzymes [BR:
sbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TGUWTKB_6080 (dnaX)
DNA replication proteins [BR:
sbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TGUWTKB_6080 (dnaX)
DNA repair and recombination proteins [BR:
sbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TGUWTKB_6080 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
RCF1-5-like_lid
Rad17
AAA_14
PIF1
ResIII
nSTAND3
AAA_5
TsaE
AAA_19
AAA_18
Sigma54_activ_2
AAA_30
AAA_16
Mg_chelatase
VapE-like_dom
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAP58832
UniProt:
A0A090AR48
LinkDB
All DBs
Position
651939..653057
Genome browser
AA seq
372 aa
AA seq
DB search
MIYQVLARKYRPQTFSEINGQTHIITALKNALSLNRLHHAYLFSGTRGIGKTTIARVLAK
GLNCKKKITDNPCRKCQHCLDIENGTSIDLIEIDAASQSKVEDIRNVLDNIQYYPLHCRF
KIYLIDEVHMLSRYSFNALLKTLEEPPNHVKFILATTDPNKLPTTIISRCLHFYLQKLTI
NEITKKLQDIVNKEKIKTELNSLTLIAKSSDGSMRDALSLTDQAIALGNGKINFIDLKYI
LGIIDEKYSLLIFESLVKGNIKKIMCLLDDIEKNGQLCENLLIEILSWIHHIAILQILPD
SLPEEKKKYLDILNNLAISVSPSDIQLYYQIFLLGRKDFYYAPCNRTGIEMIILKAIAFH
PKVTESYKTIQS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaagtattagctagaaaatatagacctcaaacattttcggaaataaatgga
caaacacatataataacagcattgaagaatgcattatcattaaatcgactacatcatgca
tatcttttttctggtactcgaggaattggaaagactacaatagctagagttttagcaaaa
ggattaaattgtaaaaaaaaaattactgataatccgtgtagaaagtgtcaacattgttta
gatatcgaaaatggtacaagtattgatttaatagaaattgatgctgcatcgcaaagtaaa
gtagaagatattagaaatgttttagacaacatacaatattaccctttacattgtcgtttt
aaaatctatcttatagatgaagtacatatgctttctcggtatagttttaatgctttatta
aaaactttagaagaacctcctaatcatgttaaatttatattagcaacaacggatcctaat
aaattacctacaacaattatatcacgatgcttacatttttatttacaaaaattaactatt
aatgagattacaaaaaagttacaagatattgtaaataaagaaaaaattaaaactgaactt
aactcattaacattaattgctaaatcatctgatggtagcatgagagatgctttaagttta
actgatcaagctatagctttaggtaatggaaaaataaattttatagatttaaaatatatt
ttagggattattgatgaaaaatattctttgttaatatttgaatctttggttaaaggtaat
attaaaaaaattatgtgtttattagatgatattgaaaaaaatggtcagttatgcgaaaac
ttattaattgagattttatcttggatacatcatattgctattttacaaattttacctgat
agtcttccagaagaaaaaaaaaaatatttagatatattaaataatttagctatttctgtt
tcacctagtgatattcaattatattatcaaatatttttattagggagaaaagatttttac
tacgctccttgcaatagaacaggaatagaaatgataattttgaaagccattgcttttcat
ccaaaagttacagaatcttataaaaccattcaaagttaa
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