Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_03090
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Entry
CA265_03090 CDS
T05546
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03030
DNA replication
sbx03430
Mismatch repair
sbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA265_03090
03430 Mismatch repair
CA265_03090
03440 Homologous recombination
CA265_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbx03032
]
CA265_03090
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_03090
Enzymes [BR:
sbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA265_03090
DNA replication proteins [BR:
sbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA265_03090
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA265_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ARS38716
UniProt:
A0A1X9Z0H0
LinkDB
All DBs
Position
764303..768736
Genome browser
AA seq
1477 aa
AA seq
DB search
MYLIFDTETTGLPRNYNAPITDTDNWPRCIQIAWQLHDEMGRLVEHQDYLVKPEGFNIPY
DAERIHGISTELATEQGIGFDEMLAKFNEVLNKAKFIVGQNVGFDVNIMGCEFHRFGVAN
RLAEMPVLDTCTEVTAQLLQLPGGRGGRFKLPTLTELHSYLFGVPFNEAHNATADVEATT
RCFLELVKREVFKKEELQVDVEYFPRFREVNPATIEGVGLKHINLKAASDEIRKRLQKAE
GGGISKQELAGNKQELAAATFVHLHNHTQFSVLQSTISIPDLVKAAAAQKMPAVAMTDHA
NMMGAFHFVNNVLNHNKAAEAKNAAAIEAGERPTEVVMTPIVGVEFFVCNNHLDRTAKDN
GYQMVLLAKNKKGYHNLAKMSSIAYTKGFYYVPRIDREVIEQYKDDIIVLSGNLSGEISN
KILNMGESQAEEALIWWKNMFGDDFYVEVMRHNQEDEDRVNESLIALARKHAVKLVATNN
TYYINKKDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSGDEMKSLFADLPE
AIVNIKEIVDKIEIYKLAREVLLPKFDIPEEFLVAEDEADGGKRGENKFLRHLTYEGAKK
RYGVLTPEVTERLDFELQTIEKTGYPGYFLIVQDFIAEARRRDVSVGPGRGSAAGSVVAY
CLWITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMEYVIGKYGSSQVAQIIT
YGTMAAKSSIRDTARVLDLPLFEADKIAKLIPNMKLAKIFTLDEKTLKEALRPDEYERVV
ELKNLGGLKDLSAETIQQAQILEGSLRNTGIHACGVIITPSDITNFVPVSTAKDSDLYVT
QFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKKRFGIDLDPDNFPIDDVLTYELFQRG
ETIGIFQYESPGMQKYMKELKPTVFDDLIAMNALYRPGPMEYIPSFVRRKNGEEEIKYDL
DACEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKPKFVKQ
AAEKGHDATTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNN
MSDIKQVAFFMEECRQMSVTVLGPDVNESDLKFSVNAKGEVRFGMSAVKGVGEKAVESII
EERLANGPYGNVYDFAKRSNTRIVNKKAYESFVYSGAFDAFGGHRAQYFYIGPNDKMNGI
EKIIKYANDFQNNESTSQASLFGGSKADLILEPSLPVSPEWALMDRLKYEKDAIGIFLSG
HPLDNYKLELDKFCTHGVKQLSIINKVRMGDNNEDILAEFEKLKNRELCVGGLVVTASQR
ITKTGKPFGTFVFEDYDDASEMALFGEDFLKFKSFLTEGYFLQIRGRVGERFGKAGDWEF
KITAINLMSELRDKLAKSLTIQVPIERVNDQLMREIEAILADNKANSEQQNCQLNFAIFD
REKEIMLDMPSKNLKINPSNKFLEQLLGLNVVNYKLN
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgatactgaaaccactggtttgcctcgtaattataacgcacccatt
accgatacggataactggccacgttgtatacaaattgcatggcaactgcacgatgagatg
gggagattggttgagcatcaggattatctggttaaaccagagggatttaatattccgtac
gatgcagagcggattcatggtatttctaccgaactggctaccgaacagggtattggtttc
gacgagatgctggcgaagtttaacgaagttttaaacaaggccaaatttattgtaggccag
aatgtgggcttcgatgtgaacattatgggctgtgagttccaccgttttggtgtagccaac
cgtttggcagagatgcccgttttggatacctgtactgaggttaccgcacagcttttacaa
ttaccaggaggtaggggtggaaggtttaaactgccaaccttaaccgagttacattcttat
ttgtttggcgttccatttaacgaagcccacaatgcaactgccgatgtggaagcaactaca
cgttgtttcctggaattggtaaaaagagaggtttttaaaaaagaagaattacaggttgat
gtagaatatttccctcgttttagagaggtaaacccagctaccattgaaggtgttggatta
aaacacatcaatttaaaggcagcttctgatgaaatccgcaaacgtttacaaaaagccgaa
ggcggcggaatttcgaagcaggaacttgccgggaacaaacaggaactggcagcagcaact
tttgtacatttacataaccatacccagttttcggtactgcaaagtaccatcagtatcccc
gatctggtaaaagctgcggcagcacaaaaaatgcctgcagtagccatgaccgatcatgcg
aacatgatgggggcttttcattttgtaaacaatgttttaaaccacaacaaagccgccgaa
gcgaaaaatgctgccgcaattgaggcgggcgaacgtccaactgaagtggtaatgacgccg
attgttggagtagaattttttgtttgtaataatcacttagaccggaccgctaaagacaac
ggttaccagatggtactgttggcgaaaaataaaaaaggctatcataatttagctaaaatg
tcttctatcgcttataccaaaggtttttattacgttccacgtattgatagggaagtaatt
gaacagtataaagatgatattattgttttatcgggtaacctttccggggagatttcgaat
aaaattttaaacatgggcgagagccaggctgaagaagcgctgatctggtggaaaaacatg
tttggcgatgatttctatgtggaggtgatgcgtcacaatcaggaagatgaagaccgtgta
aacgaatcgttgattgcattggctcgtaaacatgctgttaaattggtcgccaccaataat
acctattacattaacaaaaaggatgcgaatgcccacgatattttgctttgtgtaaaagat
ggcgaaaaacaggccacaccaattggccgtggccgtggttaccgttatggtttgcccaat
caggaatattatttcaaatctggcgatgaaatgaaatcgctttttgccgatttgccagag
gcgattgtcaatataaaagaaattgtagataagatcgaaatctacaaacttgcccgtgaa
gtactcttacctaaattcgatattcctgaagagtttttggttgctgaggacgaagccgac
ggtggaaaacgtggggagaataaatttttacgtcaccttacttacgagggtgccaagaaa
cgttatggtgtattaacccctgaagttaccgaacgtttagatttcgaattacaaaccatt
gagaaaaccggttatccgggttatttcttaattgtacaggattttattgccgaagcccgt
cgcagggatgtttcggtaggccctggccgtggctctgcagccggatcggtagtggcttat
tgtttgtggattacgaatatcgatcccattaagtacgatctcctttttgagcgtttctta
aatcccgatcgtgtatccatgcccgatattgatatcgattttgacgatgagggccgtggc
cgtgtaatggaatatgtaattggcaaatatggctccagccaggtggcacaaattatcact
tatggaaccatggccgccaaatcttctatccgagatacagcaagggtgttggatttgccg
ctttttgaagcagataagattgccaagctgattccgaacatgaagctcgccaaaatcttt
acgctggatgagaaaacactaaaagaagctttgcgtcctgatgaatatgaacgcgttgtt
gaattgaaaaaccttggaggcttaaaagatttgagtgccgaaaccattcaacaggcacag
attttagaaggctctttgcggaataccggtatccatgcctgcggggtgattattacgcca
agcgatattaccaatttcgttcctgtttctacagcaaaagactctgatttatatgttacc
caatttgataactcggttgtagaaagcgcgggtttattaaaaatggactttttgggttta
aaaacccttaccctgattaaagataccgtaaaactggttaaaaaacgctttggtatcgat
ctcgatccggataactttcccatcgatgatgttttaacctacgagcttttccagcggggt
gaaaccatcgggattttccagtacgagagtccgggtatgcagaaatacatgaaggagctg
aaaccaacggttttcgacgatttaattgcgatgaacgcattatatcgcccaggaccaatg
gagtacattccgagtttcgttcgccgtaaaaatggcgaagaagaaattaagtacgattta
gatgcctgcgaagagtatttgaaagaaacctacggaattaccgtttaccaggagcaggta
atgcttttatcgcagaaactggctggatttaccaaaggtgaggccgacgtgctgcgtaag
gcgatgggtaagaaacagaaagacgttctggataaaatgaaaccaaagtttgtgaaacaa
gcggccgaaaaaggtcatgatgccacaactttagaaaaaatatggaaagattgggaagct
tttgcatcctacgcttttaacaaatcgcactctacctgttatgcatggattgcctatcaa
acagcttatttaaaagcacattatcctgctgaatatatggctgcggtactgtcgaacaat
atgagtgatattaaacaggtagccttctttatggaagaatgtcgccagatgagcgttacg
gtattgggacctgatgtgaacgaatctgatctcaaattctcggtaaatgccaaaggcgag
gttcgttttggaatgtcggcagtaaaaggtgtgggtgaaaaggcggtagaaagtattatt
gaagaaagattagcaaatgggccttatggtaatgtatatgattttgctaaacgttccaat
acccgtattgtaaataaaaaagcttacgagagttttgtttatagcggcgctttcgatgca
tttggaggtcatagggcacagtatttttatatcggcccgaacgataaaatgaatggcatt
gaaaagattattaaatatgccaacgattttcagaacaatgaaagtacctcacaagcttcc
ttgttcggggggtctaaagctgatctgattttagaaccaagtttgccggtttcgcctgaa
tgggcattaatggacaggttaaaatacgaaaaggatgcgattgggattttcctttccggt
caccctctggataattataaactcgaactcgataaattctgtacccatggggttaaacag
ctaagcatcatcaataaggtgcgtatgggcgataacaatgaagatatattggctgaattc
gaaaaactaaaaaaccgtgagctttgtgtaggtggacttgtagtcaccgcatcgcaaagg
attaccaaaacaggtaagccatttggtacttttgttttcgaagattacgacgatgccagt
gaaatggccttgttcggcgaagattttttaaagtttaaatcgtttttaacagaaggatat
ttcttacagatcagaggtagggtaggcgagcgtttcggtaaagccggtgattgggaattt
aaaatcacagcaattaacctaatgtctgagctgagggataaattagctaaaagtttaacg
atccaggtgccgattgagcgggttaacgatcagctgatgcgcgagattgaagccatacta
gcagacaataaggcaaactctgagcagcaaaactgccaacttaacttcgctatttttgat
cgggaaaaggagattatgctggatatgccttccaaaaaccttaaaataaatccaagcaat
aagtttttagaacaattactcgggcttaatgttgtaaattacaagctgaactaa
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integrated database retrieval system
